CuGenDBv2

Gene ID	Carg05251
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transmembrane protein 220
Genome location	Carg_Chr07:3768875..3769829
RNA-Seq Expression	Carg05251
Synteny	Carg05251
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595075.1 hypothetical protein SDJN03_11628, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-83

96.93

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNL+NWDVSL+GVAY+AKATLGLGICLWVKVVAEDFVNGIAGF+SLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVVSSMVLHLIAESSSSIRTRKGER FSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

4.0e-65

76.19

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTR-----KGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R+++YG+A LVAFSYGLPIFFFL++ GKM F
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTR-----KGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

XP_022962868.1 uncharacterized protein LOC111463236 [Cucurbita moschata]

1.0e-84

100

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

XP_023003396.1 uncharacterized protein LOC111497019 [Cucurbita maxima]

5.5e-83

96.93

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSL+GVAY+AKATLGLGICLWVKVVAEDFV+GIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVS+GMASLVAFSYGLPIFFFL+QMGKMNF
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

XP_023517546.1 uncharacterized protein LOC111781274 [Cucurbita pepo subsp. pepo]

3.8e-84

98.16

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNL+NWDVSLQGVAY+AKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFL+QMGKMNF
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

1.9e-65

76.19

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTR-----KGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R+++YG+A LVAFSYGLPIFFFL++ GKM F
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTR-----KGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

A0A1S3B186 transmembrane protein 220

5.6e-65

76.51

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MA PSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIR---TRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVV SM+LHLIA SSSS +   T K +RVF R+++YG+A LVAFSYGLPIFFFL++ GKM F
Subjt:  TGSGLVVSSMVLHLIAESSSSIR---TRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

A0A5D3CNK6 Transmembrane protein 220

5.6e-65

76.51

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MA PSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIR---TRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVV SM+LHLIA SSSS +   T K +RVF R+++YG+A LVAFSYGLPIFFFL++ GKM F
Subjt:  TGSGLVVSSMVLHLIAESSSSIR---TRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

A0A6J1HG20 uncharacterized protein LOC111463236

4.9e-85

100

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Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

A0A6J1KP55 uncharacterized protein LOC111497019

2.7e-83

96.93

Show/hide

Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSL+GVAY+AKATLGLGICLWVKVVAEDFV+GIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF
        TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVS+GMASLVAFSYGLPIFFFL+QMGKMNF
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

1.7e-37

51.55

Show/hide

Query:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK
        MA P  L+  CSLLMAFLFAYS +VQ NDPDWY W PLY  AC VNL+N+   ++    + +  L LG+ L VKV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKM
         GSGLV++SMVL L A SSS           S+ + +GM + V F YGLP +FF I+ G++
Subjt:  TGSGLVVSSMVLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKM

Sequences

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CDS sequence

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ATGGCAACACCATCCAAGTTATACAGTTGCTGCTCTCTGTTAATGGCGTTTCTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTGTGGATTCC
ACTATATGGATGTGCTTGTGCTGTGAATCTTCTCAACTGGGATGTGTCCTTACAAGGCGTGGCTTATATTGCTAAGGCAACACTGGGACTTGGGATATGTTTGTGGGTGA
AGGTGGTAGCAGAGGATTTTGTGAATGGAATTGCAGGGTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTAAGGGAGAAAACAGGAAGTGGGTTGGTTGTGTCTTCCATG
GTTTTACACCTGATAGCAGAATCATCATCATCAATCAGAACAAGAAAAGGGGAAAGAGTGTTTTCAAGATATGTCTCGTACGGAATGGCATCGTTGGTGGCATTTAGTTA
TGGACTTCCCATTTTCTTCTTCTTGATTCAAATGGGCAAAATGAACTTCTGA

mRNA sequence

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AAAAAACCTTAAAGATGGATTAGTTTTCAACTTTCCACCAAACCCATGTGAGTGATATTAATTTTCAACCAAAGAAAGGAACTTTAAGACATGTCAGATACAACTAAAAC
TTATGGTTTGGCGTTGACCCATAAAGAGTTGCTGTTCGATCGGATAAGCTCTGGAGAAAAAGAGAAATGGCAACACCATCCAAGTTATACAGTTGCTGCTCTCTGTTAAT
GGCGTTTCTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTGTGGATTCCACTATATGGATGTGCTTGTGCTGTGAATCTTCTCAACTGGGATG
TGTCCTTACAAGGCGTGGCTTATATTGCTAAGGCAACACTGGGACTTGGGATATGTTTGTGGGTGAAGGTGGTAGCAGAGGATTTTGTGAATGGAATTGCAGGGTTTCTC
TCTCTAGATTTAAGTGAGAGAGTGGTAAGGGAGAAAACAGGAAGTGGGTTGGTTGTGTCTTCCATGGTTTTACACCTGATAGCAGAATCATCATCATCAATCAGAACAAG
AAAAGGGGAAAGAGTGTTTTCAAGATATGTCTCGTACGGAATGGCATCGTTGGTGGCATTTAGTTATGGACTTCCCATTTTCTTCTTCTTGATTCAAATGGGCAAAATGA
ACTTCTGA

Protein sequence

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MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYIAKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREKTGSGLVVSSM
VLHLIAESSSSIRTRKGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF

Carg05251 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome