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Carg05267 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05267
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionElongation factor 1-delta 1-like
Genome locationCarg_Chr07:3840531..3842231
RNA-Seq ExpressionCarg05267
SyntenyCarg05267
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027104.1 hypothetical protein SDJN02_11115 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-48100Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLLRPKI
        MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLLRPKI
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLLRPKI
XP_022962638.1 uncharacterized protein LOC111463055 [Cucurbita moschata]2.0e-4394.62Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKT+PWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSP R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]4.5e-4089.25Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA AAPPTTTDSFPT+NHH Y QSHH  P R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
XP_023004087.1 uncharacterized protein LOC111497503 [Cucurbita maxima]2.8e-4293.55Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFP ENHHSYRQS HPSP R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
XP_023517234.1 uncharacterized protein LOC111781060 [Cucurbita pepo subsp. pepo]8.8e-4495.7Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSP R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
TrEMBL top hitse value%identityAlignment
A0A6J1BVJ2 uncharacterized protein LOC111005740 isoform X11.8e-3988.04Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLL
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA A PPT TDSFPTENHH Y QSHHP P +L L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLL
A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X21.4e-3987.1Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA A PPT TDSFPTENHH Y QSHHP P R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
A0A6J1HFC8 uncharacterized protein LOC1114630559.5e-4494.62Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKT+PWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSP R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
A0A6J1IJV1 uncharacterized protein LOC1114780922.2e-4089.25Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA AAPPTTTDSFPT+NHH Y QSHH  P R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
A0A6J1KPF6 uncharacterized protein LOC1114975031.4e-4293.55Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
        MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFP ENHHSYRQS HPSP R  +L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown1.4e-2667.03Show/hide
Query:  DDRKEKTAPWLSVPQFGDWDQK--GQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPT---ENHHSYRQSHHPSP
        DDRKEK  PWLSVPQFGDWDQK  G MPDYS+DF+KIRE RKQNKRD SRASLGNEEELI P    T+T    T   EN   +  SHH  P
Subjt:  DDRKEKTAPWLSVPQFGDWDQK--GQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPT---ENHHSYRQSHHPSP
AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein2.7e-1154.24Show/hide
Query:  DRKEKTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI
        D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+
Subjt:  DRKEKTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI
AT5G64850.1 FUNCTIONS IN: molecular_function unknown1.6e-2260Show/hide
Query:  MDDRKE-KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAP---------AAPPTTTDSFPTENHHSYRQSHHP-SPVR
        M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI P         A P   T      N+ +    HHP SP R
Subjt:  MDDRKE-KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAP---------AAPPTTTDSFPTENHHSYRQSHHP-SPVR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTTCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCAGACTACTCTCTTGATTTCTCAAAAATTAG
GGAAAATAGGAAACAAAACAAAAGAGACGTGTCCCGGGCAAGTCTTGGAAATGAAGAGGAGCTCATTGCCCCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCACTG
AAAACCATCACTCCTATCGTCAGAGTCACCATCCTTCACCAGTAAGATTATTGCTCCTCCGACCTAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
TATTATTATTTTTTTATTTTATCGGAAGAAGAAGAATATATCAACTCTAGTGTCATTTCCGGGTGCTCTTCCTTCGCTTTTGCTTTTCGTTTTCATTCTCAATCCTCTCC
GTAGAGTAGAGAAGAACTCGAACTCGAACTCTTGCTGCTTGAAGCTTCTTCTCGTCTGGTGTTCTTTGTTGTTCTGTGAAGTGAGGACTTGCAGTTGTTACCATGGATGA
TCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTTCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCAGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATA
GGAAACAAAACAAAAGAGACGTGTCCCGGGCAAGTCTTGGAAATGAAGAGGAGCTCATTGCCCCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCACTGAAAACCAT
CACTCCTATCGTCAGAGTCACCATCCTTCACCAGTAAGATTATTGCTCCTCCGACCTAAAATTTGA
Protein sequenceShow/hide protein sequence
MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPTENHHSYRQSHHPSPVRLLLLRPKI