; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05304 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05304
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionchromatin assembly factor 1 subunit FAS2
Genome locationCarg_Chr07:4098594..4100471
RNA-Seq ExpressionCarg05304
SyntenyCarg05304
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0033186 - CAF-1 complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595124.1 Transcription factor IND, partial [Cucurbita argyrosperma subsp. sororia]5.3e-23100Show/hide
Query:  PKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIE
        PKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIE
Subjt:  PKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIE

KAG6604280.1 Chromatin assembly factor 1 subunit FAS2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1168.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HPLS LLATGGADFDI+ W      LLNSG+GQ   PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

KAG7027141.1 Chromatin assembly factor 1 subunit FAS2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-127100Show/hide
Query:  MGRCVSENTGPPREVDCEIPHRLERGTKHCLQGVDLGCYNQSQTWGGVRVRTLGPQERWIVRSHIGWREERNIAYKTITDVIKVRHQTVCQRQRIISVSR
        MGRCVSENTGPPREVDCEIPHRLERGTKHCLQGVDLGCYNQSQTWGGVRVRTLGPQERWIVRSHIGWREERNIAYKTITDVIKVRHQTVCQRQRIISVSR
Subjt:  MGRCVSENTGPPREVDCEIPHRLERGTKHCLQGVDLGCYNQSQTWGGVRVRTLGPQERWIVRSHIGWREERNIAYKTITDVIKVRHQTVCQRQRIISVSR

Query:  RFRLLQMLSKSYIGRCASEDAGLPREGRQISSASGSSFLLQFSPKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDI
        RFRLLQMLSKSYIGRCASEDAGLPREGRQISSASGSSFLLQFSPKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDI
Subjt:  RFRLLQMLSKSYIGRCASEDAGLPREGRQISSASGSSFLLQFSPKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDI

Query:  EPWANCSSRLLNSGEGQNKAPGSAVNR
        EPWANCSSRLLNSGEGQNKAPGSAVNR
Subjt:  EPWANCSSRLLNSGEGQNKAPGSAVNR

XP_022950903.1 chromatin assembly factor 1 subunit FAS2 isoform X2 [Cucurbita moschata]1.2e-1168.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HPLS LLATGGADFDI+ W      LLNSG+GQ   PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

XP_023543105.1 chromatin assembly factor 1 subunit FAS2 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-1168.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HPLS LLATGGADFDI+ W      LLNSG+GQ   PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

TrEMBL top hitse value%identityAlignment
A0A1S3B2I3 chromatin assembly factor 1 subunit FAS2 isoform X11.0e-1168.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HP+S LLATGGADFDI+ W      LLNSGE Q K PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

A0A1S3B365 chromatin assembly factor 1 subunit FAS2 isoform X21.0e-1168.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HP+S LLATGGADFDI+ W      LLNSGE Q K PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

A0A6J1BVX0 chromatin assembly factor 1 subunit FAS2 isoform X11.3e-1160.81Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP-----------GSAVN
        +K GT+QINW D+K VLTLD HPLS LLATGGADFDI+ W      LLNSGEGQ K P           GSAVN
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP-----------GSAVN

A0A6J1GG62 chromatin assembly factor 1 subunit FAS2 isoform X15.9e-1268.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HPLS LLATGGADFDI+ W      LLNSG+GQ   PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

A0A6J1GG67 chromatin assembly factor 1 subunit FAS2 isoform X25.9e-1268.33Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS
        +K GTLQINW DSK VLTLD HPLS LLATGGADFDI+ W      LLNSG+GQ   PG+
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAPGS

SwissProt top hitse value%identityAlignment
Q6ZD63 Chromatin assembly factor 1 subunit FAS2 homolog1.6e-0654.55Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCS
        ++ GT+QINW + + VLTLD HP+S  LATGG+D DI+ W   S
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCS

Q9SXY1 Chromatin assembly factor 1 subunit FAS24.1e-1053.45Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP
        +K GT+QI+W D K VLT+D HP+S LLAT GAD+DI+ W      L+NSG+ + K P
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP

Arabidopsis top hitse value%identityAlignment
AT5G64630.1 Transducin/WD40 repeat-like superfamily protein2.9e-1153.45Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP
        +K GT+QI+W D K VLT+D HP+S LLAT GAD+DI+ W      L+NSG+ + K P
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP

AT5G64630.2 Transducin/WD40 repeat-like superfamily protein2.9e-1153.45Show/hide
Query:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP
        +K GT+QI+W D K VLT+D HP+S LLAT GAD+DI+ W      L+NSG+ + K P
Subjt:  IKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGGTGTGTGAGCGAGAACACTGGGCCCCCAAGAGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAGGAACAAAACATTGCTTACAAGGTGTGGATCTGGG
CTGTTACAATCAAAGTCAGACATGGGGCGGTGTGCGAGTGAGAACACTGGGCCCCCAAGAGAGGTGGATTGTGAGATCCCACATCGGTTGGAGGGAGGAACGAAACATTG
CTTACAAGACTATTACAGATGTTATCAAAGTCAGACATCAGACGGTGTGCCAGCGTCAACGGATAATATCTGTTAGCCGTAGATTTAGACTATTACAAATGTTATCAAAG
TCATACATCGGACGATGTGCCAGCGAGGACGCTGGACTTCCAAGGGAGGGGCGCCAAATTTCATCAGCTTCCGGTTCCTCTTTCCTTCTCCAATTTAGCCCTAAAATTTC
TCCTGCGATTACTCACTTGATTGTTCAAAATTCGGAGCAGGACGAAGAAATAAAGAGTGGAACGCTTCAAATCAACTGGCTGGACTCAAAGTCAGTGCTCACCCTAGACC
TTCATCCACTTTCATGTCTCCTTGCAACCGGCGGGGCTGATTTTGATATCGAGCCATGGGCTAACTGTTCCTCTCGATTATTGAATTCGGGGGAAGGACAGAATAAAGCC
CCTGGTTCTGCTGTTAATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGGTGTGTGAGCGAGAACACTGGGCCCCCAAGAGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAGGAACAAAACATTGCTTACAAGGTGTGGATCTGGG
CTGTTACAATCAAAGTCAGACATGGGGCGGTGTGCGAGTGAGAACACTGGGCCCCCAAGAGAGGTGGATTGTGAGATCCCACATCGGTTGGAGGGAGGAACGAAACATTG
CTTACAAGACTATTACAGATGTTATCAAAGTCAGACATCAGACGGTGTGCCAGCGTCAACGGATAATATCTGTTAGCCGTAGATTTAGACTATTACAAATGTTATCAAAG
TCATACATCGGACGATGTGCCAGCGAGGACGCTGGACTTCCAAGGGAGGGGCGCCAAATTTCATCAGCTTCCGGTTCCTCTTTCCTTCTCCAATTTAGCCCTAAAATTTC
TCCTGCGATTACTCACTTGATTGTTCAAAATTCGGAGCAGGACGAAGAAATAAAGAGTGGAACGCTTCAAATCAACTGGCTGGACTCAAAGTCAGTGCTCACCCTAGACC
TTCATCCACTTTCATGTCTCCTTGCAACCGGCGGGGCTGATTTTGATATCGAGCCATGGGCTAACTGTTCCTCTCGATTATTGAATTCGGGGGAAGGACAGAATAAAGCC
CCTGGTTCTGCTGTTAATAGATAG
Protein sequenceShow/hide protein sequence
MGRCVSENTGPPREVDCEIPHRLERGTKHCLQGVDLGCYNQSQTWGGVRVRTLGPQERWIVRSHIGWREERNIAYKTITDVIKVRHQTVCQRQRIISVSRRFRLLQMLSK
SYIGRCASEDAGLPREGRQISSASGSSFLLQFSPKISPAITHLIVQNSEQDEEIKSGTLQINWLDSKSVLTLDLHPLSCLLATGGADFDIEPWANCSSRLLNSGEGQNKA
PGSAVNR