; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05317 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05317
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationCarg_Chr07:4166161..4168604
RNA-Seq ExpressionCarg05317
SyntenyCarg05317
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595132.1 Photosystem I reaction center subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-7086.55Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPE+KNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

KAG7027152.1 Photosystem I reaction center subunit N, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.9e-74100Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_022963255.1 photosystem I reaction center subunit N, chloroplastic-like isoform X1 [Cucurbita moschata]3.8e-7086.55Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023003251.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita maxima]2.9e-7086.55Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023518442.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.3e-7087.13Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A1S3B240 photosystem I reaction center subunit N, chloroplastic9.4e-6781.29Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LFAAAAA+SNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N9.4e-6781.29Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LFAAAAA+SNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1BT08 photosystem I reaction center subunit N, chloroplastic isoform X11.4e-6580.12Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSA   VASPGV+GYKLPAIRAQQARVPEAKN+GRRTALL+LGA+LFAAAAA+SNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FG+CKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1HHG7 photosystem I reaction center subunit N, chloroplastic-like isoform X11.8e-7086.55Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1KNN3 photosystem I reaction center subunit N, chloroplastic isoform X11.4e-7086.55Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
                              FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)7.7e-2661.29Show/hide
Query:  SSNSSANAGVIEEYLEKSKANK----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ++  SA A + +EYLEKSKANK                      FGSC+FP NFTGCQDLAKQKKVPFISDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SSNSSANAGVIEEYLEKSKANK----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic2.0e-2959.68Show/hide
Query:  AQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK----------------------FGSCKFPENFTGCQDLAKQKKVPFI
        A   RV  A  + RR+ALL L A++FAA AAS+  SA A V +EYLEKSK NK                      FGSCKFP NFTGCQDLAKQKKVPFI
Subjt:  AQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK----------------------FGSCKFPENFTGCQDLAKQKKVPFI

Query:  SDDLELECEGKDKYKCGSNVFWKW
        +DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic1.2e-4257.23Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA S  +SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA

Query:  NK----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NK                      FGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NK----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic2.0e-1340.91Show/hide
Query:  AIRAQQARVPEAK-----------NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKF----------------------GSCKFPENFT
        A+RAQ A+V  A+           +   R  LL LG  L AAA A    +ANAGV+E+ L KS ANK                       G+C+FPENF 
Subjt:  AIRAQQARVPEAK-----------NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKF----------------------GSCKFPENFT

Query:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS
        GC++LA  K V +I++DL++ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)8.4e-4457.23Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA S  +SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA

Query:  NK----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NK                      FGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NK----------------------FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)3.0e-2550.69Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA S  +SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA

Query:  NK----------------------FGSCKFPENFTGCQDLAKQK
        NK                      FGSCKFPENFTGCQDLAKQK
Subjt:  NK----------------------FGSCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTG
CTGCGGCTGCTGCTTCCTCCAACTCTTCGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGTTTGGATCATGCAAGTTCCCAGAGAACTTC
ACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTG
GAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
TTTGTTCCCCCTCCAACCAATGTGGAATCTCACAATTCACCCCCTTGAGAGCCAGCGTCCTCGTTGACACGTAACGGACCAAAACAGACAATATCTGCTAGTGGTGGGTT
TGGAGTGTTGTTATAAGTAACCACTCCAGAAACTGTACTCCGATTTTACAATGGCAAATTGCCTAGTTTGTTGCCATCATGTATTGAAGGGAACACAGATCATGTACTAA
TTAGATCTGTACTACTTACATTCAGTCCGAAAATAAAGTCAAAATGTTTTTAGCCGTGTAAGTTGATTCTTTGATTCAATAACTAGCTCCAGCAAAATGGCATTGAATGA
TGAAAGTTGTGCCAATATATATCATAATTTTTTCTGCACTTAATTGAACTAGTATAATTTTGGAAGTTTTAGAGCCATTCTAGTTTAACCGATTTAACTAAAATTCAATT
TGCTTGAACGTTCCCCATCACGTTTAGATTTCAAAGTGGGTCCAAAATTGAAGCTCGCCACACACATTTTCATGTCCAAAAAACCCTAATCACAGCCATGGATTGCCAAT
TGGGAGTGAGGAAATCTCACCTTATCCACACTCTCACCACAATTCCTTATCCAATTCCATCTCAGACGTCGTTCATTTATCAGATTCCCTCATAATCCCATTTCCCCATT
AACAACTCTCCACCATTAATCCTCCTCCTTCGAGCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACT
ACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAA
CAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTTCGGCTAATGC
TGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCC
CATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGAAGAGAACAGAACAATTTATTGAAGTCT
TTGTATCTAATTTTCAACTTTTAAGAAGTGTGAAATTTTATTAAGTCCAATTCCATTGCTTTCTTTCTTCTCTTTCAGACCAAAAGAAGCCAAATGAGAGTAGAAACCCT
AGAAATCTATTGCTTTAGCTTTGTTAATGTTAATAATGTTCGGGAAGGTAACTAAAAGATATATTTAATAGTCAATTTGAGCATAATTCAATACAGAAAATACCAATTTT
ATCGATAGATAATTCAATC
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKFGSCKFPENF
TGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW