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Carg05359 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05359
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCarg_Chr07:4429470..4429874
RNA-Seq ExpressionCarg05359
SyntenyCarg05359
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595178.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6697.1Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH----SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFE
        MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH    SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFE
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH----SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFE

Query:  QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

KAG7027194.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-68100Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022962864.1 auxin-induced protein 6B-like [Cucurbita moschata]1.0e-6698.53Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH--SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH  SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH--SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022972619.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]4.3e-6598.51Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTEGE SSHNE LLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_023517185.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]1.6e-6799.25Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLL DRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

TrEMBL top hitse value%identityAlignment
A0A1S3CHA6 auxin-induced protein X154.6e-5788.24Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTEGESSSHNECLLRDRLESSKDHDSHSP-SPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        ML KKMVSFKKLAKKVK VRVGT+ E  SHNECLL DRLE ++DHDS+SP SPTSTPTG FA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTEGESSSHNECLLRDRLESSKDHDSHSP-SPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAF+EIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1EDQ2 auxin-induced protein 15A5.0e-5990.3Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS SPS  STPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        L+VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1HIA1 auxin-induced protein 6B-like4.9e-6798.53Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH--SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH  SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH--SPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1IC38 auxin-responsive protein SAUR50-like2.1e-6598.51Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTEGE SSHNE LLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1ILC7 auxin-induced protein 15A-like1.6e-5788.81Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS SPS  +TPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        L+VPCSVSAFQEIVSAVEC NGRFDFGE+VEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.6e-0937.88Show/hide
Query:  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        +S P+G   V VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+++V ++
Subjt:  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

O65695 Auxin-responsive protein SAUR503.3e-1246.27Show/hide
Query:  PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        P   P G F VYVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    FQ + S +
Subjt:  PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

Q9LTV3 Auxin-responsive protein SAUR726.3e-1143.94Show/hide
Query:  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        +S P G   VYVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+ I+ ++
Subjt:  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

Q9SA49 Auxin-responsive protein SAUR411.6e-0934.52Show/hide
Query:  HDSHSPSP----------TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        H  H+P P           + P G   VYVG+E +RFVV    ++HP+F  LL+++ +E+G+ Q+  L +PC V  F+ +V  +
Subjt:  HDSHSPSP----------TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

Q9ZUZ3 Auxin-responsive protein SAUR321.2e-0935.71Show/hide
Query:  LESSKDHDSHSPSPTSTPTGSFAVYV---GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        L+S + H   S      P G  A+ V   G+E+QRF+VP  + +HPLF  LL +A  E+GF+Q+  + +PC V  F+ + + ++
Subjt:  LESSKDHDSHSPSPTSTPTGSFAVYV---GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE

Arabidopsis top hitse value%identityAlignment
AT2G36210.1 SAUR-like auxin-responsive protein family8.4e-3558.16Show/hide
Query:  MLGKKMVSFKKLAKKVK-----VRVGTEGES-SSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-
        MLGK++ SFK LAKK+K      R G EG S S++NE LL +      + D  +   + TPTG+FAVYVG+ER + VVPTS+L+HPLFRMLLDK++ EF 
Subjt:  MLGKKMVSFKKLAKKVK-----VRVGTEGES-SSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-

Query:  GFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
         FEQ+  LVVPCS+S FQ++V+AVE CNG FDFGE VEEFL
Subjt:  GFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

AT3G20210.2 delta vacuolar processing enzyme6.3e-1434.75Show/hide
Query:  VSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPS--PTSTPTGSFAVYVG-DERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVV
        V  K+    ++     E   +   E  ++DRL S +  D   P+      P G  AVYVG +ERQRFV+PT +L +P FR L+D+   EFG++    + +
Subjt:  VSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPS--PTSTPTGSFAVYVG-DERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVV

Query:  PCSVSAFQEIVSAVECCN
        PC  S F+EI+     C+
Subjt:  PCSVSAFQEIVSAVECCN

AT3G43120.1 SAUR-like auxin-responsive protein family1.9e-1544.44Show/hide
Query:  ESSKDHDSHSPS-PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        +S ++    SP  P   P G  AVYVG E +RF++PT+FLSH LF++LL+KA  E+GF+   AL +PC V  F+ ++  +E
Subjt:  ESSKDHDSHSPS-PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G20810.1 SAUR-like auxin-responsive protein family7.9e-1744.68Show/hide
Query:  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        S + N+ LL  +   S +    SP P    P G+ AVYVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G20810.2 SAUR-like auxin-responsive protein family7.9e-1744.68Show/hide
Query:  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        S + N+ LL  +   S +    SP P    P G+ AVYVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCG
ATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGA
CGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTT
CAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCG
ATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGA
CGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTT
CAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG
Protein sequenceShow/hide protein sequence
MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAF
QEIVSAVECCNGRFDFGEIVEEFL