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Carg05397 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05397
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein FAM98A isoform X1
Genome locationCarg_Chr19:1013269..1014027
RNA-Seq ExpressionCarg05397
SyntenyCarg05397
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571577.1 Protein SULFUR DEFICIENCY-INDUCED 1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5999.24Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGGRGYGRGRGRGQIDGQTRDNGGSR Q
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

KAG7011319.1 hypothetical protein SDJN02_26223, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-65100Show/hide
Query:  MVLSINLADPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRG
        MVLSINLADPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRG
Subjt:  MVLSINLADPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRG

Query:  WTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        WTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
Subjt:  WTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

XP_022963610.1 protein FAM98A isoform X1 [Cucurbita moschata]3.3e-60100Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

XP_022963612.1 protein FAM98A isoform X3 [Cucurbita moschata]3.3e-60100Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

XP_023553963.1 protein argonaute 18-like isoform X2 [Cucurbita pepo subsp. pepo]5.8e-4990.08Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQSRGRGR  GRGRGWGRGGYGNYQGGYGN       YQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDN GYSNWSRG GRGRGWTYRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGR GRGYGRGRGRG+IDGQTRDNGGSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

TrEMBL top hitse value%identityAlignment
A0A6J1E011 protein FAM98A-like2.0e-3980Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPG----GYQGNYQDNGGYSNWSRGGGRGRGWTYR
        DPYGQSRGRGR  GRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYG YQGG G+ QGGSG YQ GG G    G  G YQDNGGYSNW RGGGRGRGWTYR
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPG----GYQGNYQDNGGYSNWSRGGGRGRGWTYR

Query:  GTGYDRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        GTGYDRGRGGRGYGRGRGR  + G+TR  G  R Q
Subjt:  GTGYDRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

A0A6J1HFQ0 protein FAM98A isoform X31.6e-60100Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

A0A6J1HIH0 protein FAM98A isoform X11.6e-60100Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

A0A6J1HQG7 TATA-binding protein-associated factor 2N-like isoform X24.2e-4587.02Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQS+GRGR  GRGRGWGRGGYGNYQGGYGN       YQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGW YRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGG GY RGRGR  ID QTRDN GSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

A0A6J1HRM7 protein FAM98A-like isoform X14.2e-4587.02Show/hide
Query:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY
        DPYGQS+GRGR  GRGRGWGRGGYGNYQGGYGN       YQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGW YRGTGY
Subjt:  DPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGY

Query:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ
        DRGRGG GY RGRGR  ID QTRDN GSRNQ
Subjt:  DRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ

SwissProt top hitse value%identityAlignment
Q9SL15 Glycine-rich protein 37.8e-0456.18Show/hide
Query:  RGRGRGGGRGRGWG--RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGG----GPGGYQGNYQDNG----GYSNWSR
        RG G  GG     G  +GG GNYQGG GNYQGG G+YQGG G YQGG G YQGG G YQGG    G GG  G+Y  +G    GY+  SR
Subjt:  RGRGRGGGRGRGWG--RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGG----GPGGYQGNYQDNG----GYSNWSR

Arabidopsis top hitse value%identityAlignment
AT2G05520.1 glycine-rich protein 35.5e-0556.18Show/hide
Query:  RGRGRGGGRGRGWG--RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGG----GPGGYQGNYQDNG----GYSNWSR
        RG G  GG     G  +GG GNYQGG GNYQGG G+YQGG G YQGG G YQGG G YQGG    G GG  G+Y  +G    GY+  SR
Subjt:  RGRGRGGGRGRGWG--RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGG----GPGGYQGNYQDNG----GYSNWSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTTCTATAAATTTGGCAGATCCATATGGTCAAAGCCGAGGTCGAGGTCGAGGTGGAGGGAGAGGGCGTGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGG
GGGATATGGCAACTACCAGGGCGGATATGGCCATTACCAAGGCGGATATGGCCATTACCAAGGCGGATATGGCCACTATCAAGGTGGATCTGGTGGCTACCAAGGTGGTG
GCCCTGGCGGCTACCAAGGCAACTATCAAGATAATGGTGGGTACTCGAATTGGAGTAGAGGTGGTGGGCGAGGCCGAGGTTGGACATATCGTGGAACTGGCTATGATAGA
GGCAGAGGGGGGAGGGGTTATGGTCGAGGTCGAGGTCGGGGTCAGATAGACGGACAAACAAGGGACAATGGTGGCAGTAGAAACCAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTTCTATAAATTTGGCAGATCCATATGGTCAAAGCCGAGGTCGAGGTCGAGGTGGAGGGAGAGGGCGTGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGG
GGGATATGGCAACTACCAGGGCGGATATGGCCATTACCAAGGCGGATATGGCCATTACCAAGGCGGATATGGCCACTATCAAGGTGGATCTGGTGGCTACCAAGGTGGTG
GCCCTGGCGGCTACCAAGGCAACTATCAAGATAATGGTGGGTACTCGAATTGGAGTAGAGGTGGTGGGCGAGGCCGAGGTTGGACATATCGTGGAACTGGCTATGATAGA
GGCAGAGGGGGGAGGGGTTATGGTCGAGGTCGAGGTCGGGGTCAGATAGACGGACAAACAAGGGACAATGGTGGCAGTAGAAACCAG
Protein sequenceShow/hide protein sequence
MVLSINLADPYGQSRGRGRGGGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQGGGPGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDR
GRGGRGYGRGRGRGQIDGQTRDNGGSRNQ