CuGenDBv2

Gene ID	Carg05403
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription initiation factor IIF subunit alpha
Genome location	Carg_Chr19:953423..958872
RNA-Seq Expression	Carg05403
Synteny	Carg05403
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0005674 - transcription factor TFIIF complex (cellular component) GO:0001096 - TFIIF-class transcription factor complex binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	IPR008851 - Transcription initiation factor IIF, alpha subunit IPR011039 - Transcription Factor IIF, Rap30/Rap74, interaction IPR036388 - Winged helix-like DNA-binding domain superfamily IPR036390 - Winged helix DNA-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571571.1 Transcription initiation factor IIF subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-267

98.81

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Query:  MAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQ
        MAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQ
Subjt:  MAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQ

Query:  SATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDEN
        SATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDEN
Subjt:  SATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDEN

Query:  EGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEE
        EGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEE
Subjt:  EGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEE

Query:  NEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPL
        NEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLP KQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPL
Subjt:  NEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPL

Query:  KKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVV
        KKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVV
Subjt:  KKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVV

Query:  LRKPED
        LRKPED
Subjt:  LRKPED

KAG7011313.1 Transcription initiation factor IIF subunit alpha [Cucurbita argyrosperma subsp. argyrosperma]

8.1e-296

100

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Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
        DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
        PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV

Query:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022963620.1 transcription initiation factor IIF subunit alpha-like [Cucurbita moschata]

3.0e-290

98.71

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Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
        DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE+DDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
        PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIR VLRQRTPVTTQDLV
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV

Query:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022967231.1 transcription initiation factor IIF subunit alpha-like [Cucurbita maxima]

1.6e-288

98.16

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Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAANNGAAAFGEVEKFDDKEG R GGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
        DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
        PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAP KKMKTETESKPTDEAL+TS+STASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV

Query:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_023553940.1 transcription initiation factor IIF subunit alpha-like [Cucurbita pepo subsp. pepo]

6.8e-287

97.98

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Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIF
        KAANNGAAAFGEVEKFDDKEG R  GGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIF
Subjt:  KAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIF

Query:  TDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASS
        TDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASS
Subjt:  TDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASS

Query:  SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL
        SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAP KKMKTETESKPTDEAL+TS+STASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL
Subjt:  SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL

Query:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA6 Transcription initiation factor IIF subunit alpha

1.2e-265

91.36

Show/hide

Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MS DL+LK SCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGAT+TRLIREYNVR+SAS+DKNY IGRFMSGLPNFSKK+NAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGR L+DALREKYKNRPW+LEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAA+NG AAFGEVEKFDDKE V T GRGRRK TGDENEGN SDRGEEDEEEEA RKNRLGL+KKGGGDDDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASS
        DDDETTAPDREEREDLAPEVPAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD +EDTG TPVLPSKQKDTVKEEAA++
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASS

Query:  SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL
        SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAP KKMKTETESK TDE + TS+STASKGAP SVKTE +S+SGPVTEEEIRAVLRQRTPVTTQDL
Subjt:  SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL

Query:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        VAKFKARLR  EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha

9.4e-266

91.36

Show/hide

Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MS DL+LKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGAT+TRLIREYNVR+SASSDKNY IGRFMSGLPNFSKK+NAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGR LTDALREKYKNRPW+LEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAA+NG AAFGEVEKFDDKE V T GRGRRK TGDENEGN SDRGEEDEEEEA RKNRLGL+KKGGGDDDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASS
        DDDETTAPDREEREDLAPEVPAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDD +EDTG TPVLPSKQKDTVKEEAA++
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASS

Query:  SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL
        SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAP KKMKTETE KPTDE + TS+STASKGAP SVKTE +S+SGPVTEEEIRAVLRQRTPVTTQDL
Subjt:  SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL

Query:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        VAKFKARLR  EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha

7.0e-261

90.28

Show/hide

Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDL+LKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGAT+TRLIREYNVR+S+SSDKNY IGRFMSGLPNFSKK+NAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGR LTDALREKYKNRPW+LEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAA+NG AAFGEVEKFDDK+ V   GRGRRK T DENEGN SDRGEEDEEEEA RKNRLGLNKKGGGDDDD+EGPRGG+HD+DDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDDDDDDEEDTGDTPVLPSKQKDTVKEEAAS
        DDDETTAPDREEREDLAPEVPAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG  EDDDDDD EE++G TPV PSKQKD VKEEAA+
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDDDDDDEEDTGDTPVLPSKQKDTVKEEAAS

Query:  SSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQD
        +SPSKP PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAP KKMKTETESK TDE ++TSRSTASKGA  SVKTE AS SGPVTEEEIRAVLRQRTPVTTQD
Subjt:  SSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQD

Query:  LVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        LVAKFKARLR  EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  LVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1HGK0 Transcription initiation factor IIF subunit alpha

1.4e-290

98.71

Show/hide

Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
        DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE+DDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
        PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIR VLRQRTPVTTQDLV
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV

Query:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1HRF9 Transcription initiation factor IIF subunit alpha

7.9e-289

98.16

Show/hide

Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
        KAANNGAAAFGEVEKFDDKEG R GGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT
Subjt:  KAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFT

Query:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
        DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS
Subjt:  DDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
        PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAP KKMKTETESKPTDEAL+TS+STASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLV

Query:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  AKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

SwissProt top hits

e value

%identity

Alignment

Q54WV4 General transcription factor IIF subunit 1

4.8e-09

26.16

Show/hide

Query:  KNRPWVLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFG
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   W     YNF    +++ LT EEAE+ MK + +  D +   + K  +   +  G
Subjt:  KNRPWVLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFG

Query:  EVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDRE
          E    K          R    D N    ++  ++ ++  A R+ R     +G G+D D         D DDD    GD        T +DE    + E
Subjt:  EVEKFDDKEGVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDRE

Query:  EREDL-----APEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQ------KDTVKEEAASSS
        E ED+       E+    + +Q   D ED+  + +     +G         TGG +D D ++DD+D D++D  + P +  K         +VK+E     
Subjt:  EREDL-----APEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQ------KDTVKEEAASSS

Query:  PSKPTPSGSAKGTPSTAKTAKGK-RKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL
         SK +     K   S+ K+ + K +KN  D    +   KK+K E  S    +  + S+    +   +        N  P TEE I+ VL++   V + DL
Subjt:  PSKPTPSGSAKGTPSTAKTAKGK-RKNGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL

Query:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNG
        +  FK  L+  ++K  F  ++  ++R+ + NG
Subjt:  VAKFKARLRCKEDKNAFAEILRRISRIQKTNG

Q9SU25 Transcription initiation factor IIF subunit alpha

4.9e-179

66.37

Show/hide

Query:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  +TRLIREYNVR++A +DKNY IGRF++GLPNF  KK +ENKWSL K+  
Subjt:  MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGL

Query:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM
        QGR  TDA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMM
Subjt:  QGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMM

Query:  KAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKAT-GDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEI
        KAANNG A FGEV+   +  G    GGRGR+K++ GDE EGN SDRG+EDEEEEA+RK+RLGLN+K   DDDD+EGPRGGD DMDDDDIEKGDDWEHEEI
Subjt:  KAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKAT-GDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEI

Query:  FTDDDETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAA
        FTDDDE    D EERED LAPE+PAPPEIKQD++DEE+EE   EGGLSKSGKELKKLL +  GL++SD +DDDD DDEE+T    V  SKQK+  KEE  
Subjt:  FTDDDETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAA

Query:  SSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPLKKMKTETESKPT---DEALTTSRST----ASKGAPVSVKTESAS-NSGPVTEEEIRAV
         ++P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE + K +   + A T S+S     A K  P S    S+S  +GPVTE+EIRAV
Subjt:  SSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPLKKMKTETESKPT---DEALTTSRST----ASKGAPVSVKTESAS-NSGPVTEEEIRAV

Query:  LRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRK
        L ++  VTTQDLV++FKARL+ KEDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  LRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRK

Arabidopsis top hits

e value

%identity

Alignment

AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

3.0e-115

64.71

Show/hide

Query:  LQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKAT-GDENEGNASD
        +Q KEF AIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAANNG A FGEV+   +  G    GGRGR+K++ GDE EGN SD
Subjt:  LQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKAT-GDENEGNASD

Query:  RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEG
        RG+EDEEEEA+RK+RLGLN+K   DDDD+EGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQD++DEE+EE   EG
Subjt:  RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEG

Query:  GLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPLKKM
        GLSKSGKELKKLL +  GL++SD +DDDD DDEE+T    V  SKQK+  KEE   ++P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+
Subjt:  GLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPLKKM

Query:  KTETESKPT---DEALTTSRST----ASKGAPVSVKTESAS-NSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGG
        KTE + K +   + A T S+S     A K  P S    S+S  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+ KEDKNAFA ILR+IS+IQK  G 
Subjt:  KTETESKPT---DEALTTSRST----ASKGAPVSVKTESAS-NSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGG

Query:  PSYVVLRK
         ++VVLR+
Subjt:  PSYVVLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

3.0e-115

64.71

Show/hide

Query:  LQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKAT-GDENEGNASD
        +Q KEF AIPAGSW     YNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAANNG A FGEV+   +  G    GGRGR+K++ GDE EGN SD
Subjt:  LQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVR-TGGRGRRKAT-GDENEGNASD

Query:  RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEG
        RG+EDEEEEA+RK+RLGLN+K   DDDD+EGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQD++DEE+EE   EG
Subjt:  RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEG

Query:  GLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPLKKM
        GLSKSGKELKKLL +  GL++SD +DDDD DDEE+T    V  SKQK+  KEE   ++P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+
Subjt:  GLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPLKKM

Query:  KTETESKPT---DEALTTSRST----ASKGAPVSVKTESAS-NSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGG
        KTE + K +   + A T S+S     A K  P S    S+S  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+ KEDKNAFA ILR+IS+IQK  G 
Subjt:  KTETESKPT---DEALTTSRST----ASKGAPVSVKTESAS-NSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGG

Query:  PSYVVLRK
         ++VVLR+
Subjt:  PSYVVLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTGGATTTGATGCTGAAGCCATCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGTAAGCACATGACATTGTGCTTGTCCTGTGGCAAAAC
TATGGCTGAGAACAAGGGAAAATGTTATGACTGTGGCGCTACCCTAACTCGCTTAATAAGAGAATACAATGTTCGATCAAGTGCAAGTAGCGACAAGAACTACTGCATTG
GTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAAAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCACCTTACGGATGCCCTTCGG
GAAAAGTACAAGAATAGACCCTGGGTCTTGGAAGATGAAACGGGTCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCAACATATTACTTGCTTGTATTGCA
AGGAAAGGAATTTACTGCCATTCCTGCTGGTTCTTGGGTGAAAATTTTCAAGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACTTTGGAGGAGGCAGAAGAAA
AAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGGTGGATGATGAAAGCTGCAAATAATGGTGCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAA
GGTGTTCGCACTGGTGGTAGGGGACGGAGAAAAGCTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAGGAAGATGAAGAAGAAGAGGCAACAAGGAAGAA
CAGATTGGGACTCAATAAAAAGGGTGGCGGTGATGATGATGATGATGAAGGTCCTAGGGGAGGTGACCATGACATGGATGATGATGATATTGAGAAAGGAGATGATTGGG
AGCATGAAGAGATTTTTACTGATGACGATGAAACTACTGCTCCGGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGAT
GAAGACGAGGAGGATGAAGAAAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGCACTGGAGGGCTTAATGATTCAGATGGAGA
GGACGACGACGACGACGACGACGAGGAGGATACTGGTGACACTCCAGTTTTGCCTTCGAAGCAGAAGGATACAGTTAAGGAAGAAGCTGCGTCCAGCAGTCCCTCAAAAC
CAACACCTTCTGGATCTGCTAAGGGAACCCCCTCCACTGCAAAGACAGCAAAAGGAAAAAGAAAAAACGGCGAGGATGTGAAACCATCCAGTGCACCTCTGAAGAAAATG
AAAACAGAGACGGAATCAAAGCCTACAGATGAAGCCTTGACTACTTCTAGAAGTACAGCCTCAAAAGGTGCACCAGTATCCGTCAAAACTGAATCAGCATCGAATTCTGG
ACCCGTTACTGAGGAAGAAATTAGAGCTGTCTTGCGCCAAAGGACACCCGTAACGACGCAGGATCTTGTTGCGAAATTCAAGGCAAGACTGCGATGTAAAGAGGACAAGA
ATGCTTTTGCAGAGATTCTTAGGAGAATCTCAAGGATTCAAAAGACGAACGGAGGACCAAGTTACGTCGTGTTGAGAAAACCCGAAGACTAG

mRNA sequence

Show/hide mRNA sequence

TATCATTCCCGTTTTCGCCTGCAATTTTCTCAAAATTCTAATCGCTCTCTTCATCTTCTTTCTGTTCTTCGGTTCCTCTCTTAAATTTCTCTCTGCTACTGCTATTAGCT
TCCTCTCTCTCTGTTATATCGTCTAATTTCTGTGGATTGAGGAGGATTTTGCACGAATTTGCCCTGCTCCTGCAATTTTACGATTTTTGTGGCTGAATTAGGGGGTCGCG
ATGTCTTTGGATTTGATGCTGAAGCCATCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGTAAGCACATGACATTGTGCTTGTCCTGTGGCAAAAC
TATGGCTGAGAACAAGGGAAAATGTTATGACTGTGGCGCTACCCTAACTCGCTTAATAAGAGAATACAATGTTCGATCAAGTGCAAGTAGCGACAAGAACTACTGCATTG
GTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAAAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCACCTTACGGATGCCCTTCGG
GAAAAGTACAAGAATAGACCCTGGGTCTTGGAAGATGAAACGGGTCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCAACATATTACTTGCTTGTATTGCA
AGGAAAGGAATTTACTGCCATTCCTGCTGGTTCTTGGGTGAAAATTTTCAAGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACTTTGGAGGAGGCAGAAGAAA
AAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGGTGGATGATGAAAGCTGCAAATAATGGTGCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAA
GGTGTTCGCACTGGTGGTAGGGGACGGAGAAAAGCTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAGGAAGATGAAGAAGAAGAGGCAACAAGGAAGAA
CAGATTGGGACTCAATAAAAAGGGTGGCGGTGATGATGATGATGATGAAGGTCCTAGGGGAGGTGACCATGACATGGATGATGATGATATTGAGAAAGGAGATGATTGGG
AGCATGAAGAGATTTTTACTGATGACGATGAAACTACTGCTCCGGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGAT
GAAGACGAGGAGGATGAAGAAAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGCACTGGAGGGCTTAATGATTCAGATGGAGA
GGACGACGACGACGACGACGACGAGGAGGATACTGGTGACACTCCAGTTTTGCCTTCGAAGCAGAAGGATACAGTTAAGGAAGAAGCTGCGTCCAGCAGTCCCTCAAAAC
CAACACCTTCTGGATCTGCTAAGGGAACCCCCTCCACTGCAAAGACAGCAAAAGGAAAAAGAAAAAACGGCGAGGATGTGAAACCATCCAGTGCACCTCTGAAGAAAATG
AAAACAGAGACGGAATCAAAGCCTACAGATGAAGCCTTGACTACTTCTAGAAGTACAGCCTCAAAAGGTGCACCAGTATCCGTCAAAACTGAATCAGCATCGAATTCTGG
ACCCGTTACTGAGGAAGAAATTAGAGCTGTCTTGCGCCAAAGGACACCCGTAACGACGCAGGATCTTGTTGCGAAATTCAAGGCAAGACTGCGATGTAAAGAGGACAAGA
ATGCTTTTGCAGAGATTCTTAGGAGAATCTCAAGGATTCAAAAGACGAACGGAGGACCAAGTTACGTCGTGTTGAGAAAACCCGAAGACTAGAAGAATTAAGTGTATGTT
TCATCTTTATGATGTTACTGGTTTTCATCGACTACAATGTTTATGTGGTGAAACTGTGTGCTGCAAAAGCTCGAGGAGCCTCCTCTTCTTTCACTCACATGGTGTGGTGC
TTTTATCTAGGCAAAGGGCAAAGGGCAAAGGGCAAAGGGCAAAGGGCAAAGGG

Protein sequence

Show/hide protein sequence

MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALR
EKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWVKIFKYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKE
GVRTGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDD
EDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPLKKM
KTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

Carg05403 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome