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Carg05406 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05406
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein 5-like
Genome locationCarg_Chr19:935776..936072
RNA-Seq ExpressionCarg05406
SyntenyCarg05406
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571569.1 putative pectate lyase 15, partial [Cucurbita argyrosperma subsp. sororia]2.0e-35100Show/hide
Query:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
        MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
Subjt:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP

KAG7011310.1 hypothetical protein SDJN02_26214, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-35100Show/hide
Query:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
        MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
Subjt:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP

XP_011652144.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]4.0e-2070Show/hide
Query:  MAN-KLNLMLIMAMAVAAFALHVAARTAP-IEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG
        MAN KLNLML+MAMA+AAFA HV ART P  +AAKGLNDQKNFL     GGFSGIGDSGLPF      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVG
Subjt:  MAN-KLNLMLIMAMAVAAFALHVAARTAP-IEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG

Query:  ----------GVGGGFVKIP
                  G GGG VK+P
Subjt:  ----------GVGGGFVKIP

XP_022963787.1 glycine-rich protein 5-like [Cucurbita moschata]4.4e-3598.98Show/hide
Query:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
        MANKLNLMLIMAMA+AAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
Subjt:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP

XP_023511522.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]3.7e-3496.94Show/hide
Query:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
        MANKLNLMLIMAMA+AAFALHVAARTAPIEAAKGLNDQKNFL GGFSGIGDSGLPFGGLGGGGGLGG+GGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
Subjt:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP

TrEMBL top hitse value%identityAlignment
A0A0A0LEM4 Uncharacterized protein1.9e-2070Show/hide
Query:  MAN-KLNLMLIMAMAVAAFALHVAARTAP-IEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG
        MAN KLNLML+MAMA+AAFA HV ART P  +AAKGLNDQKNFL     GGFSGIGDSGLPF      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVG
Subjt:  MAN-KLNLMLIMAMAVAAFALHVAARTAP-IEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG

Query:  ----------GVGGGFVKIP
                  G GGG VK+P
Subjt:  ----------GVGGGFVKIP

A0A1S3BI24 acanthoscurrin-2-like2.5e-2071.43Show/hide
Query:  MAN-KLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG-
        MAN KLNLML+MAM  AA ALHVAARTAP EAAKGLNDQKNFL     GGFSGIGD GLPF      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVG 
Subjt:  MAN-KLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG-

Query:  ---------GVGGGFVKIP
                 G GGG VK+P
Subjt:  ---------GVGGGFVKIP

A0A5A7UCJ9 Acanthoscurrin-2-like2.5e-2071.43Show/hide
Query:  MAN-KLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG-
        MAN KLNLML+MAM  AA ALHVAARTAP EAAKGLNDQKNFL     GGFSGIGD GLPF      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVG 
Subjt:  MAN-KLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLPF------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG-

Query:  ---------GVGGGFVKIP
                 G GGG VK+P
Subjt:  ---------GVGGGFVKIP

A0A6J1ETH1 acanthoscurrin-2-like4.8e-1155.56Show/hide
Query:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLPF-------------------GGLGGGGGLGGIGGGLGGF-G
        MAN+L L++ MAM + AFA  V ARTAP + AK ++DQKNF+     GGFSGIGDSGLPF                   GGLGGGGGLGG+GGG+GG  G
Subjt:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLPF-------------------GGLGGGGGLGGIGGGLGGF-G

Query:  GVGIGGIGAGVGGVGGG
        G G+GG+G G+GG GGG
Subjt:  GVGIGGIGAGVGGVGGG

A0A6J1HG59 glycine-rich protein 5-like2.1e-3598.98Show/hide
Query:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
        MANKLNLMLIMAMA+AAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP
Subjt:  MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29030.1 Putative membrane lipoprotein3.0e-0552.58Show/hide
Query:  IMAMAVAAFALHVAARTAPIEAAKGLNDQKNFL--GGGFSGIGDSGLPFGGLGGG----------GGLGGIGGGLGGFGGVGIGGIGAGV-GGVGGG
        I  +   A AL   AR  P+    GL+DQKN+L  GGG+SG+GD+GLPFGG+GGG          GG GG GGGLG  GG+G GG G+G+ GG+GGG
Subjt:  IMAMAVAAFALHVAARTAPIEAAKGLNDQKNFL--GGGFSGIGDSGLPFGGLGGG----------GGLGGIGGGLGGFGGVGIGGIGAGV-GGVGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATAAGCTTAATTTGATGTTGATTATGGCTATGGCTGTGGCTGCATTTGCACTCCATGTTGCTGCAAGAACTGCCCCAATTGAGGCTGCAAAAGGCCTCAATGA
CCAAAAGAACTTCCTCGGCGGTGGCTTCTCTGGCATTGGTGATAGCGGACTCCCCTTTGGAGGACTCGGAGGAGGCGGTGGCTTGGGCGGGATCGGCGGTGGCCTTGGCG
GGTTCGGTGGGGTTGGCATCGGTGGCATCGGTGCCGGAGTTGGCGGGGTTGGTGGTGGATTTGTTAAGATTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATAAGCTTAATTTGATGTTGATTATGGCTATGGCTGTGGCTGCATTTGCACTCCATGTTGCTGCAAGAACTGCCCCAATTGAGGCTGCAAAAGGCCTCAATGA
CCAAAAGAACTTCCTCGGCGGTGGCTTCTCTGGCATTGGTGATAGCGGACTCCCCTTTGGAGGACTCGGAGGAGGCGGTGGCTTGGGCGGGATCGGCGGTGGCCTTGGCG
GGTTCGGTGGGGTTGGCATCGGTGGCATCGGTGCCGGAGTTGGCGGGGTTGGTGGTGGATTTGTTAAGATTCCTTGA
Protein sequenceShow/hide protein sequence
MANKLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLGGGFSGIGDSGLPFGGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGGVGGGFVKIP