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Carg05407 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05407
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStress response protein nst1
Genome locationCarg_Chr19:933196..934028
RNA-Seq ExpressionCarg05407
SyntenyCarg05407
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650841.1 hypothetical protein Csa_017605, partial [Cucumis sativus]6.6e-1178.18Show/hide
Query:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLS
        M E  V GMGSVLIMLVVVG +L LPLVIGS+QPPSG +LL+FPVTLAAVFF+LS
Subjt:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLS

KAG7011309.1 hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-50100Show/hide
Query:  MSGRVMQAVRFMNSGSEVQARVRSPFADATPRYSAIHSTVSGGDRSKFQVGMGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAA
        MSGRVMQAVRFMNSGSEVQARVRSPFADATPRYSAIHSTVSGGDRSKFQVGMGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAA
Subjt:  MSGRVMQAVRFMNSGSEVQARVRSPFADATPRYSAIHSTVSGGDRSKFQVGMGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAA

Query:  VFFLLSRASSN
        VFFLLSRASSN
Subjt:  VFFLLSRASSN

XP_008447644.1 PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo]4.9e-1480Show/hide
Query:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN
        M E SV GMGSVLIMLVVVG +LFLPL+IGS+QPPSG +LL+FPVTLAAVFF+LSRASS+
Subjt:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN

XP_011652820.1 uncharacterized protein LOC105435116 [Cucumis sativus]3.2e-1378.33Show/hide
Query:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN
        M E  V GMGSVLIMLVVVG +L LPLVIGS+QPPSG +LL+FPVTLAAVFF+LSRASS+
Subjt:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN

XP_038888108.1 uncharacterized protein LOC120078008 [Benincasa hispida]4.9e-1481.67Show/hide
Query:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN
        M + SV GMGSVL+MLVVVG +LFLPLVIGS+QPPSGL+LLIFPVTLAAVFF LSRASS+
Subjt:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN

TrEMBL top hitse value%identityAlignment
A0A1S3BHY2 uncharacterized protein LOC1034900512.4e-1480Show/hide
Query:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN
        M E SV GMGSVLIMLVVVG +LFLPL+IGS+QPPSG +LL+FPVTLAAVFF+LSRASS+
Subjt:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN

A0A2J6MK22 Uncharacterized protein9.9e-0564.71Show/hide
Query:  GMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRAS
        G+GSV+ ML VVGC+LFLPLV+G V PPS  +LLI PV LAAV   L  AS
Subjt:  GMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRAS

A0A2P5C9B1 Uncharacterized protein4.5e-0557.89Show/hide
Query:  ENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASS
        +  VCG+ SV+ +LVV   +LFLPL +G VQPPS   LLI P+ L  VF LLSRASS
Subjt:  ENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASS

A0A2P5EXP0 Uncharacterized protein8.1e-0761.4Show/hide
Query:  ENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASS
        +N VCG+ SV+++LVV   +LFLPL +G VQPPS   LLIFP+ L  VF LLSRASS
Subjt:  ENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASS

A0A5A7T8Q7 Stress response protein nst12.4e-1480Show/hide
Query:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN
        M E SV GMGSVLIMLVVVG +LFLPL+IGS+QPPSG +LL+FPVTLAAVFF+LSRASS+
Subjt:  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGTCGAGTCATGCAAGCAGTTCGATTTATGAATAGCGGGTCGGAAGTTCAGGCACGGGTCAGGTCGCCCTTTGCTGACGCGACACCGAGATATTCAGCCATTCA
CTCAACTGTGTCGGGCGGAGATCGATCGAAGTTTCAGGTCGGAATGGGAGAAAATAGTGTGTGTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGGTGTATTT
TGTTTCTGCCGCTGGTGATCGGCTCCGTTCAGCCGCCGTCCGGCCTTATGCTGCTTATTTTTCCGGTCACTCTCGCCGCCGTGTTCTTCCTCCTCTCACGTGCGTCCTCC
AATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGTCGAGTCATGCAAGCAGTTCGATTTATGAATAGCGGGTCGGAAGTTCAGGCACGGGTCAGGTCGCCCTTTGCTGACGCGACACCGAGATATTCAGCCATTCA
CTCAACTGTGTCGGGCGGAGATCGATCGAAGTTTCAGGTCGGAATGGGAGAAAATAGTGTGTGTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGGTGTATTT
TGTTTCTGCCGCTGGTGATCGGCTCCGTTCAGCCGCCGTCCGGCCTTATGCTGCTTATTTTTCCGGTCACTCTCGCCGCCGTGTTCTTCCTCCTCTCACGTGCGTCCTCC
AATTGA
Protein sequenceShow/hide protein sequence
MSGRVMQAVRFMNSGSEVQARVRSPFADATPRYSAIHSTVSGGDRSKFQVGMGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASS
N