; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05412 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05412
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein D-34-like
Genome locationCarg_Chr17:1269766..1270358
RNA-Seq ExpressionCarg05412
SyntenyCarg05412
Gene Ontology termsNA
InterPro domainsIPR007011 - Late embryogenesis abundant protein, SMP subgroup domain
IPR042971 - Late embryogenesis abundant protein, SMP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574978.1 Late embryogenesis abundant protein 31, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6186.79Show/hide
Query:  MSRTAAPHEQLEPMVLFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAP
        MSRTAAPHEQLEPMVLFNVSGDVVSK  P                   RPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAP
Subjt:  MSRTAAPHEQLEPMVLFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAP

Query:  IILVVIAMQSAVTIGQALEATVHAAGDKPQSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        IILVVIAMQSAVTIGQALEATVHAAGDKPQSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
Subjt:  IILVVIAMQSAVTIGQALEATVHAAGDKPQSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

KAG6593887.1 hypothetical protein SDJN03_13363, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2951.18Show/hide
Query:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI
        H+Q +P+    +FNVSGD+ SK IPPVDADMMQ              P         R  R GFVG  D+TDA RD+ + +K      I  +  ++A Q+
Subjt:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI

Query:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        +GQFVEP P I   I  Q+A+TIGQALEAT H AGDKP  +SDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

XP_022930294.1 late embryogenesis abundant protein D-34-like [Cucurbita moschata]9.1e-3051.76Show/hide
Query:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI
        H+Q +P+    +FNVSGD+ SK IPPVDADMMQ              P         R  R GFVG +D+TDA RD+ + +K      I  +  ++A Q+
Subjt:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI

Query:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        VGQFVEP P I   I  Q+A+TIGQALEAT H AGDKP  +SDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

XP_022999952.1 late embryogenesis abundant protein D-34-like [Cucurbita maxima]2.0e-2951.76Show/hide
Query:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI
        H+Q  P+    +FNVSGD+ SK IPPVDADMMQ              P         R  R GFVG +D+TDA RD+ + +K      I  +  ++A Q+
Subjt:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI

Query:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        VGQFVEP P I   I  Q+A+TIGQALEAT H AGDKP  +SDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

XP_023514760.1 late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo]9.1e-3051.76Show/hide
Query:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI
        H+Q +P+    +FNVSGD+ SK IPPVDADMMQ              P         R  R GFVG +D+TDA RD+ + +K      I  +  ++A Q+
Subjt:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI

Query:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        VGQFVEP P I   I  Q+A+TIGQALEAT H AGDKP  +SDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

TrEMBL top hitse value%identityAlignment
A0A0A0K7E4 Uncharacterized protein1.3e-2652.2Show/hide
Query:  LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAPII
        +FN++GD+ SKVIPPVDADMMQ              P         R    GFVG ED++DA RD+ + +K         +   +A QIVGQFVEP    
Subjt:  LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAPII

Query:  LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
             MQ+AVTIGQALEAT H AGDKP  QSDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

A0A5A7TCZ1 Late embryogenesis abundant protein D-34-like8.6e-2650.94Show/hide
Query:  LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRR--PC-----------RFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAPII
        +FNV+GD+ SKVIPPVDADMMQ        + ++  P            R GFVG +D++DA RD+ + +K         +   +A QIVGQFVEP    
Subjt:  LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRR--PC-----------RFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAPII

Query:  LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
             +Q+AVTIGQALEA  H AGDKP  QSDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

A0A6J1C9L5 late embryogenesis abundant protein D-34-like4.1e-2852.66Show/hide
Query:  EQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIV
        +Q EP+    +FNVSGD+ SK IPPVDADMMQ              P         R  R G VG ED++DA RD+ + +K         +   +A QIV
Subjt:  EQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIV

Query:  GQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        GQFVEP P I  V  MQ+AVTIGQ LEAT H AGDKP  QSDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  GQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

A0A6J1ER33 late embryogenesis abundant protein D-34-like4.4e-3051.76Show/hide
Query:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI
        H+Q +P+    +FNVSGD+ SK IPPVDADMMQ              P         R  R GFVG +D+TDA RD+ + +K      I  +  ++A Q+
Subjt:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI

Query:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        VGQFVEP P I   I  Q+A+TIGQALEAT H AGDKP  +SDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

A0A6J1KC62 late embryogenesis abundant protein D-34-like9.8e-3051.76Show/hide
Query:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI
        H+Q  P+    +FNVSGD+ SK IPPVDADMMQ              P         R  R GFVG +D+TDA RD+ + +K      I  +  ++A Q+
Subjt:  HEQLEPMV---LFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQI

Query:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        VGQFVEP P I   I  Q+A+TIGQALEAT H AGDKP  +SDAAA QA EVR  GSN VIPGGLAA AQ
Subjt:  VGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

SwissProt top hitse value%identityAlignment
P09444 Late embryogenesis abundant protein D-343.0e-2041.14Show/hide
Query:  AAPHEQLEPMV---LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPR-------------RPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLA
        A   E  EP+    +FNVSG++ +K I P DA MMQ      L + +             R  + G VG  D+TD   ++ + L          +   +A
Subjt:  AAPHEQLEPMV---LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPR-------------RPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLA

Query:  RQIVGQFVEPAPIIL--VVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
         Q+VGQ+V+  P++   V + +Q+A+TIG+ALEAT   AGDKP  QSDAAA QA EVR  GSN +IPGGLAA AQ
Subjt:  RQIVGQFVEPAPIIL--VVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

Q8GWT7 Late embryogenesis abundant protein 471.6e-0546.97Show/hide
Query:  VEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        V    ++   +  +  +TIG+ALEA V  AG+KP   SDAAA QA EVR  G   ++PGG+AA AQ
Subjt:  VEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

Q9LJ95 Late embryogenesis abundant protein 327.2e-1435.47Show/hide
Query:  PHEQLEPMVLFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVG
        P E ++   +F VSG++  K I P DA MMQ              P            R GFV  +D T+   ++   ++  +     +    +  Q+VG
Subjt:  PHEQLEPMVLFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVG

Query:  QFVEPAPIILVV----IAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        Q VEP  ++        A+QS +TIG+ALEATV  AG+KP  QSDAAA QA E+R  G+N +   G+AA AQ
Subjt:  QFVEPAPIILVV----IAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

Q9LJ97 Late embryogenesis abundant protein 316.3e-1837.3Show/hide
Query:  MSRTAAPHEQLEPMV---LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRR-------------PCRFGFVGLEDLTDATRDKELLLKTPISQEIASLL
        MS+   P    EP+    +F VSG++  K I P DA+MMQ          ++               R GFV   D TD   ++ + +            
Subjt:  MSRTAAPHEQLEPMV---LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRR-------------PCRFGFVGLEDLTDATRDKELLLKTPISQEIASLL

Query:  IQLARQIVGQFVEPAPII--------LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
          +  Q+VGQ+VEP P+         +V +++QSA+TIG+ALEATV  AG+KP  QSDAAA QA EVR  G+N + PGG+AA AQ
Subjt:  IQLARQIVGQFVEPAPII--------LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

Q9SA57 Late embryogenesis abundant protein 33.6e-0545.33Show/hide
Query:  LARQIVGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        +AR+    F +P P +  + ++ + VTIG+ALEAT  + GDKP  + DAAA QA E R  G +   PGGLA  AQ
Subjt:  LARQIVGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

Arabidopsis top hitse value%identityAlignment
AT1G03120.1 responsive to abscisic acid 282.6e-0645.33Show/hide
Query:  LARQIVGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        +AR+    F +P P +  + ++ + VTIG+ALEAT  + GDKP  + DAAA QA E R  G +   PGGLA  AQ
Subjt:  LARQIVGQFVEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

AT3G22490.1 Seed maturation protein4.5e-1937.3Show/hide
Query:  MSRTAAPHEQLEPMV---LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRR-------------PCRFGFVGLEDLTDATRDKELLLKTPISQEIASLL
        MS+   P    EP+    +F VSG++  K I P DA+MMQ          ++               R GFV   D TD   ++ + +            
Subjt:  MSRTAAPHEQLEPMV---LFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRR-------------PCRFGFVGLEDLTDATRDKELLLKTPISQEIASLL

Query:  IQLARQIVGQFVEPAPII--------LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
          +  Q+VGQ+VEP P+         +V +++QSA+TIG+ALEATV  AG+KP  QSDAAA QA EVR  G+N + PGG+AA AQ
Subjt:  IQLARQIVGQFVEPAPII--------LVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

AT3G22500.1 Seed maturation protein5.1e-1535.47Show/hide
Query:  PHEQLEPMVLFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVG
        P E ++   +F VSG++  K I P DA MMQ              P            R GFV  +D T+   ++   ++  +     +    +  Q+VG
Subjt:  PHEQLEPMVLFNVSGDVVSKVIPPVDADMMQL-------------PRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVG

Query:  QFVEPAPIILVV----IAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        Q VEP  ++        A+QS +TIG+ALEATV  AG+KP  QSDAAA QA E+R  G+N +   G+AA AQ
Subjt:  QFVEPAPIILVV----IAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ

AT5G27980.1 Seed maturation protein1.1e-0646.97Show/hide
Query:  VEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ
        V    ++   +  +  +TIG+ALEA V  AG+KP   SDAAA QA EVR  G   ++PGG+AA AQ
Subjt:  VEPAPIILVVIAMQSAVTIGQALEATVHAAGDKP--QSDAAAFQAVEVRVKGSNAVIPGGLAACAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGAACAGCCGCGCCGCACGAACAGCTAGAACCTATGGTGTTGTTCAACGTCTCTGGAGACGTTGTCTCCAAGGTTATACCACCCGTGGACGCTGACATGATGCA
ACTGCCGAGACCATGGTGTTTAGTCAAACCCAGGCGGCCCTGCCGTTTTGGCTTCGTTGGCCTCGAGGATTTAACTGATGCTACCAGAGATAAGGAGTTGCTGTTAAAGA
CACCGATATCCCAGGAAATCGCATCATTACTGATACAGTTGGCCAGACAGATCGTTGGGCAGTTTGTGGAGCCTGCGCCCATTATTTTAGTTGTCATAGCAATGCAGAGC
GCGGTCACCATAGGACAAGCCCTTGAAGCGACCGTTCATGCTGCAGGTGATAAACCGCAGAGCGATGCTGCTGCCTTTCAAGCAGTAGAGGTGAGGGTAAAAGGGAGCAA
TGCCGTGATACCAGGTGGACTCGCAGCCTGTGCTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGAACAGCCGCGCCGCACGAACAGCTAGAACCTATGGTGTTGTTCAACGTCTCTGGAGACGTTGTCTCCAAGGTTATACCACCCGTGGACGCTGACATGATGCA
ACTGCCGAGACCATGGTGTTTAGTCAAACCCAGGCGGCCCTGCCGTTTTGGCTTCGTTGGCCTCGAGGATTTAACTGATGCTACCAGAGATAAGGAGTTGCTGTTAAAGA
CACCGATATCCCAGGAAATCGCATCATTACTGATACAGTTGGCCAGACAGATCGTTGGGCAGTTTGTGGAGCCTGCGCCCATTATTTTAGTTGTCATAGCAATGCAGAGC
GCGGTCACCATAGGACAAGCCCTTGAAGCGACCGTTCATGCTGCAGGTGATAAACCGCAGAGCGATGCTGCTGCCTTTCAAGCAGTAGAGGTGAGGGTAAAAGGGAGCAA
TGCCGTGATACCAGGTGGACTCGCAGCCTGTGCTCAGTAG
Protein sequenceShow/hide protein sequence
MSRTAAPHEQLEPMVLFNVSGDVVSKVIPPVDADMMQLPRPWCLVKPRRPCRFGFVGLEDLTDATRDKELLLKTPISQEIASLLIQLARQIVGQFVEPAPIILVVIAMQS
AVTIGQALEATVHAAGDKPQSDAAAFQAVEVRVKGSNAVIPGGLAACAQ