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Carg05433 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05433
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLeucine-rich repeat receptor-like serine/threonine-protein kinase
Genome locationCarg_Chr17:1405788..1407860
RNA-Seq ExpressionCarg05433
SyntenyCarg05433
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574998.1 hypothetical protein SDJN03_25637, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4083.33Show/hide
Query:  SWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVV
        SWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTW IDPWWKTFSCCAPCSKNSCKR +  + I    + I+ 
Subjt:  SWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVV

Query:  LD
        ++
Subjt:  LD
KAG7013569.1 hypothetical protein SDJN02_23736, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-115100Show/hide
Query:  MTYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCIILRLFALLSFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFET
        MTYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCIILRLFALLSFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFET
Subjt:  MTYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCIILRLFALLSFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFET

Query:  EVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVVLDRHLEDNNFSVVRFHCHLELCLA
        EVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVVLDRHLEDNNFSVVRFHCHLELCLA
Subjt:  EVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVVLDRHLEDNNFSVVRFHCHLELCLA
XP_022930386.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucurbita moschata]7.6e-2646.88Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF
        TYYYGGVNGLDSPPVFDQIVD TVWS+V+T+ D+  GL  +   +        + CI                                  LRL A  SF
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFGN+S NVT+RTVSAS IWNL PSK+FETE+K DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
XP_023000021.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucurbita maxima]9.9e-2646.25Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCII--------------------------------------LRLFALLSF
        TYYYGGVNGLDSPPVFDQIVD TVWS+V+T+ D+  GL  +   +       I                                      LRL A  SF
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCII--------------------------------------LRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFGN+S NVT+RTVSAS IWNL PSK+FETE+K DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
XP_038876012.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Benincasa hispida]7.4e-2949.38Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF
        TYYYGGVNGLDSPPVFDQIVD TVWSVV+T+ D+ RGL  +   +        S CI                                  LRL A  SF
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFGNN+WNVTNRTVSAS IWNL PSK+FETE++ DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
TrEMBL top hitse value%identityAlignment
A0A0A0KI45 Malectin_like domain-containing protein9.1e-2545Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF
        TYYYGGVNG+ SPPVFDQIVD TVWS+V+T+ D+ RGL  +   +        S CI                                  LRL A  SF
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFG+++ NVTNRTVSAS IWNL PSK+FETE++ D+LE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
A0A1S3BN88 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g144402.4e-2546.25Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF
        TYYYGGVNGL SPPVFDQIVD TVWSVV+T+ D+  GL  +   +        S CI                                  LRL A  +F
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFG+N+ NVTNRTVSAS IWNL PSK+FETE++ DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
A0A5A7V488 Putative leucine-rich repeat receptor-like serine/threonine-protein kinase2.4e-2546.25Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF
        TYYYGGVNGL SPPVFDQIVD TVWSVV+T+ D+  GL  +   +        S CI                                  LRL A  +F
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFG+N+ NVTNRTVSAS IWNL PSK+FETE++ DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
A0A6J1EQS7 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g144403.7e-2646.88Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF
        TYYYGGVNGLDSPPVFDQIVD TVWS+V+T+ D+  GL  +   +        + CI                                  LRL A  SF
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRC-----SKCI---------------------------------ILRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFGN+S NVT+RTVSAS IWNL PSK+FETE+K DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
A0A6J1KEQ4 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g144404.8e-2646.25Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCII--------------------------------------LRLFALLSF
        TYYYGGVNGLDSPPVFDQIVD TVWS+V+T+ D+  GL  +   +       I                                      LRL A  SF
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCII--------------------------------------LRLFALLSF

Query:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
                    Q D FWQPFGN+S NVT+RTVSAS IWNL PSK+FETE+K DKLE LE
Subjt:  ------------QVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05990.1 Leucine-rich repeat (LRR) family protein1.3e-1530.67Show/hide
Query:  TYYYGGVNGLDS-PPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLL-----RCSKCI----------------ILRLFALL------------------
        TYYYGGVNG  + PPVFDQIVD T+W +V+T+ D+  GL  +   +        S C+                ++RL   L                  
Subjt:  TYYYGGVNGLDS-PPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLL-----RCSKCI----------------ILRLFALL------------------

Query:  -----------SFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLEAT
                     Q D FW+P+  NS    NR +  S  WNL PS++F T+++  +++ LE T
Subjt:  -----------SFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLEAT
AT3G19230.1 Leucine-rich repeat (LRR) family protein3.4e-0859.46Show/hide
Query:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRG
        TYYYG  +G ++PPVFDQI+  T WSVV+TS D+ +G
Subjt:  TYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTATTACTACGGCGGAGTTAATGGCCTTGATTCGCCGCCGGTTTTCGATCAGATTGTTGATAGGACTGTTTGGAGCGTGGTGAGTACTTCTGGGGACTTTGGCAG
GGGATTGCGTCGTTTTTGTCATAATTTGTTGCGGTGCTCCAAATGTATTATCTTGCGTCTGTTTGCATTACTTTCTTTTCAAGTTGATCACTTTTGGCAACCATTTGGGA
ATAACAGTTGGAACGTAACCAATAGAACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGGTAAAGAATGATAAGCTGGAACAATTG
GAGGCCACATTGCTCTATACTTTGCTAATGATCATGTTGTTTTTGCAAGCCGGTGGCTCCCTCTCCCCAGTCAAGACTTGGTCCATTGATCCATGGTGGAAAACCTTTTC
ATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGTATGTCTGATCTTTCCATTGCTGGTTTCATGATGTTTATTGTAGTTCTTGACAGGCATTTGGAAGATAATA
ACTTCAGTGTGGTGAGATTTCATTGTCACTTGGAACTTTGCCTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTATTACTACGGCGGAGTTAATGGCCTTGATTCGCCGCCGGTTTTCGATCAGATTGTTGATAGGACTGTTTGGAGCGTGGTGAGTACTTCTGGGGACTTTGGCAG
GGGATTGCGTCGTTTTTGTCATAATTTGTTGCGGTGCTCCAAATGTATTATCTTGCGTCTGTTTGCATTACTTTCTTTTCAAGTTGATCACTTTTGGCAACCATTTGGGA
ATAACAGTTGGAACGTAACCAATAGAACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGGTAAAGAATGATAAGCTGGAACAATTG
GAGGCCACATTGCTCTATACTTTGCTAATGATCATGTTGTTTTTGCAAGCCGGTGGCTCCCTCTCCCCAGTCAAGACTTGGTCCATTGATCCATGGTGGAAAACCTTTTC
ATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGTATGTCTGATCTTTCCATTGCTGGTTTCATGATGTTTATTGTAGTTCTTGACAGGCATTTGGAAGATAATA
ACTTCAGTGTGGTGAGATTTCATTGTCACTTGGAACTTTGCCTTGCTTGA
Protein sequenceShow/hide protein sequence
MTYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCIILRLFALLSFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQL
EATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVVLDRHLEDNNFSVVRFHCHLELCLA