; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05469 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05469
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c oxidase assembly factor 4-like protein
Genome locationCarg_Chr17:1628331..1629544
RNA-Seq ExpressionCarg05469
SyntenyCarg05469
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575028.1 hypothetical protein SDJN03_25667, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3398.63Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MGNPPISPENQ PLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
XP_004153368.1 cytochrome c oxidase assembly factor 4 homolog, mitochondrial isoform X2 [Cucumis sativus]1.9e-2784.93Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MG PPISPENQPPLH SDAD +DENVKQLNECSSFYLSLQ+CLIKTNRNWK CQAEVQALK+C+ERRK+G  K
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
XP_008458528.1 PREDICTED: cytochrome c oxidase assembly factor 4 homolog, mitochondrial [Cucumis melo]5.6e-2783.56Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MG PPISPEN+PPLH SDAD +DENVKQLNECSSFYLSLQ+CLIKTNRNWK CQAEVQALK+C+ERRK+G  K
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
XP_022958916.1 uncharacterized protein LOC111460064 [Cucurbita moschata]1.6e-34100Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
XP_038874602.1 uncharacterized protein LOC120067191 [Benincasa hispida]3.6e-2683.56Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MG PP SPENQPPLH SDA+ DDENVKQLNECSSFYLSLQ+CLIKTNRNWK CQAEVQALK+C+ERRK G  K
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
TrEMBL top hitse value%identityAlignment
A0A0A0KEH3 Uncharacterized protein9.4e-2884.93Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MG PPISPENQPPLH SDAD +DENVKQLNECSSFYLSLQ+CLIKTNRNWK CQAEVQALK+C+ERRK+G  K
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
A0A1S3C8M5 cytochrome c oxidase assembly factor 4 homolog, mitochondrial2.7e-2783.56Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MG PPISPEN+PPLH SDAD +DENVKQLNECSSFYLSLQ+CLIKTNRNWK CQAEVQALK+C+ERRK+G  K
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
A0A5A7SQI1 Cytochrome c oxidase assembly factor 4-like protein2.7e-2783.56Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MG PPISPEN+PPLH SDAD +DENVKQLNECSSFYLSLQ+CLIKTNRNWK CQAEVQALK+C+ERRK+G  K
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
A0A6J1H3G8 uncharacterized protein LOC1114600647.9e-35100Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
A0A6J1L1R2 uncharacterized protein LOC1114990627.9e-35100Show/hide
Query:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
        MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
Subjt:  MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18920.1 Cox19-like CHCH family protein3.0e-1871.43Show/hide
Query:  PPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERR
        PP H  DAD DDENVKQL ECSS YLSLQ+CL+ +NR+WK CQ  VQALK C+ERR
Subjt:  PPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATCCGCCGATTTCGCCGGAGAATCAGCCGCCTCTTCACGGGAGCGACGCCGACGCCGACGACGAGAACGTCAAGCAGCTCAATGAATGCTCCTCTTTCTACTT
ATCGTTACAGGAATGTCTTATCAAAACTAACAGGAACTGGAAAGATTGCCAGGCTGAGGTTCAAGCTTTGAAGGCTTGCAATGAGAGAAGGAAAACTGGCCATGGCAAGT
GA
mRNA sequenceShow/hide mRNA sequence
TTTTAATCATTCCCTTAACTTGAGCAGTTCGAACTGCCTGTAAAATTAGCGTCGTACCTGAACGTAGAAAAATGGGGAATCCGCCGATTTCGCCGGAGAATCAGCCGCCT
CTTCACGGGAGCGACGCCGACGCCGACGACGAGAACGTCAAGCAGCTCAATGAATGCTCCTCTTTCTACTTATCGTTACAGGAATGTCTTATCAAAACTAACAGGAACTG
GAAAGATTGCCAGGCTGAGGTTCAAGCTTTGAAGGCTTGCAATGAGAGAAGGAAAACTGGCCATGGCAAGTGAAGGTTCTGGAAAGGAGCATAGTGTACCAGATCACATC
TAAGATATTGGCTTTACTCATTCACAATTTTGTTATATTGACTCGTTTAAACGTATTTTGAGATATCTAAAAGCTTGATTGTTCTGAAACCTTATCATTATGTCAAGCTA
TGCTTATCTTAGCCTATTTCTGCTCGTGACCTGAGAATTTGAATCATACAACAAAAGGGTATATATAAGCCGATCGTTACCTCAAAAAAGAGTATATATTAGTTGCTGTC
GAGCTATGCTTATATTACCCATATTTCTGCTCGTGACTTAAGATCTTGAGAATCTGAATCATACAACAAAAGAGTATATATTAGCGGCTCGTTACCTCAAAAAAGAGCAT
ATATTAGTTGCTGTTGAGCTATGCTTATGTTAGTCGTGACCTAAGATCTGAGAATTTGAATCTCAAAAGAGTATATATTAGCTTACCTCAAAAAGGAGTATGTATTCGTT
GCTGTCGAGCTATGCTTATGTTAGCCCTATTTTTTCTTGTGACCTGAGATCTGAGAATTTGAATCATACAACA
Protein sequenceShow/hide protein sequence
MGNPPISPENQPPLHGSDADADDENVKQLNECSSFYLSLQECLIKTNRNWKDCQAEVQALKACNERRKTGHGK