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Carg05474 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05474
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLow-density receptor-like protein
Genome locationCarg_Chr17:1655401..1663121
RNA-Seq ExpressionCarg05474
SyntenyCarg05474
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575035.1 hypothetical protein SDJN03_25674, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4298.94Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQM
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQM
XP_008458516.1 PREDICTED: uncharacterized protein LOC103497900 isoform X2 [Cucumis melo]2.2e-3991.58Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV++GNDGK +GS AIRRLLHQMD
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
XP_011656653.1 uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus]2.6e-4092.63Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQMD
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
XP_022959154.1 uncharacterized protein LOC111460229 [Cucurbita moschata]4.3e-43100Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
XP_031742567.1 uncharacterized protein LOC101217077 isoform X1 [Cucumis sativus]6.4e-3992.47Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQ
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ
TrEMBL top hitse value%identityAlignment
A0A0A0KBE9 Uncharacterized protein1.8e-3991.49Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQM
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQM
A0A1S3C7I8 uncharacterized protein LOC103497900 isoform X21.1e-3991.58Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV++GNDGK +GS AIRRLLHQMD
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
A0A1S3C994 uncharacterized protein LOC103497900 isoform X11.5e-3890.43Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQM
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV++GNDGK +GS AIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQM
A0A6J1H763 uncharacterized protein LOC1114602292.1e-43100Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
A0A6J1L4G6 uncharacterized protein LOC1114990612.1e-43100Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein4.9e-2967.02Show/hide
Query:  ASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD
        +S T RI FR V+++ L++V+FYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG REG++ K SG    RRLL   D
Subjt:  ASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGACGGCTAGGATTACGTTTCGCGTTGTTATGGTGGTGATCCTCCTCCTCGTCGTTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCAACTGT
ACATGATATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAATCGGACTCTGGCGTCC
GTGAAGGAAATGATGGAAAGAATTCCGGATCGGGTGCTATTCGGAGGCTGCTTCATCAGATGGATTGA
mRNA sequenceShow/hide mRNA sequence
TGAACGACAGCTGGCATAAGAGAAAATTGAATCGATAAATAAGAGAAATATAAATAGCAAGGTGAAAGCACGGAGCTTCTCTTCTTTTTGCCTGATCTAACCATTTCAAC
TCCCTCGTGGGAATCTCTGAGCTCTGATAGATCACAGTCTTTGCTTCTCTGTTTCTTTCCACAAGATATAACCATCGGAAACAATGGCGTCGTCGACGGCTAGGATTACG
TTTCGCGTTGTTATGGTGGTGATCCTCCTCCTCGTCGTTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCAACTGTACATGATATTCGCCAGAACAAACAGAC
CGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAATCGGACTCTGGCGTCCGTGAAGGAAATGATGGAAAGAATTCCG
GATCGGGTGCTATTCGGAGGCTGCTTCATCAGATGGATTGAAAAAGTCCTGCTGGGTTCCTGGAGTTGGATGAATTCATCACATCAGAACTATTTACAATGAGCCAAATA
TAATGCCGAAAGATGAGAAGAACAATGGCTGAACCAACAACCACCACCTATCAAGTTAGGCTTTTTTGGGGGGAATAATGTGCAACTTTTCTAATATAATATATAGGTTA
AAAATTGTACTTTCAATCAAACTTAGTTTTTATTGA
Protein sequenceShow/hide protein sequence
MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQMD