; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05497 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05497
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein beta chain, ciliary protein
Genome locationCarg_Chr17:1812995..1816655
RNA-Seq ExpressionCarg05497
SyntenyCarg05497
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-98100Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY

Query:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
Subjt:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]8.4e-8386.24Show/hide
Query:  MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESGALDSGDV  S+S N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVER

Query:  YDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGS
        Y RPMP+LR+T++ SSKYEDRPAPPGTLNVAQMR IILLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPEDSL+DK K S
Subjt:  YDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGS

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]1.7e-9698.41Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY

Query:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHI+LLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSL+DKKK SK
Subjt:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]4.3e-9596.3Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESG+LDSGDVLGSNS NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY

Query:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        +RPMP+LRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKA+DHDGPMGVNQIAERYNVGV+QIRTILQFLSLPPEDSL+DKKKGSK
Subjt:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

XP_023547640.1 uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]1.3e-9698.41Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRA EKARESGALDSGD LGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY

Query:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSL+DKKKGSK
Subjt:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein4.1e-8386.24Show/hide
Query:  MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESGALDSGDV  S+S N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVER

Query:  YDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGS
        Y RPMP+LR+T++ SSKYEDRPAPPGTLNVAQMR IILLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPEDSL+DK K S
Subjt:  YDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGS

A0A1S3C957 uncharacterized protein LOC103497865 isoform X12.0e-8285.26Show/hide
Query:  MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS +ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+S N LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVER

Query:  YDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        Y RPMP+LR+T++KSSKYEDRPAPPGTLNVAQMR IILLHEGKA+DHDGPMG +QIAERYNV VAQI+TILQFLSLPPEDSL+DK   SK
Subjt:  YDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

A0A6J1C9H1 uncharacterized protein LOC1110095501.9e-8082.2Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEAS
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA +KA     RESGALDSG +LGSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEAS

Query:  VVERYDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKK
        VVERY+RPMP+LRNTD+KSS+YEDRPAPPGTLNVAQMRH+I LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSLPPED+L+ K K
Subjt:  VVERYDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKK

A0A6J1H4J6 uncharacterized protein LOC1114599758.4e-9798.41Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY

Query:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHI+LLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSL+DKKK SK
Subjt:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

A0A6J1L288 uncharacterized protein LOC1114991802.1e-9596.3Show/hide
Query:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESG+LDSGDVLGSNS NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERY

Query:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK
        +RPMP+LRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKA+DHDGPMGVNQIAERYNVGV+QIRTILQFLSLPPEDSL+DKKKGSK
Subjt:  DRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein1.3e-4651.3Show/hide
Query:  MGQAFRRAAGRIKPAS-------SIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGE
        MGQ  RRA G+IK          SID  +   +  S V   P   A +   + G   S D       NVLEERDP++D ML+QM GRI++KPGGK EMGE
Subjt:  MGQAFRRAAGRIKPAS-------SIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGE

Query:  ASVVERYDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKK
        ASVVE   RP+P+LRNT  +S++YE+ P P GTLNVAQ+RHI+LL +GK++DH GPMGVN+IAE+Y + V+Q++ I QFLSLP E + + KK+
Subjt:  ASVVERYDRPMPRLRNTDLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATAAAACCGGCTTCGAGTATCGACTCCTCTGCCTCTTCGTTGAAAATGGAGAGCGTCGTAGATCGGAAGCCTCCACC
GCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCGCTGGATTCTGGTGACGTCTTGGGAAGTAATTCTGAAAATGTGCTCGAAGAAAGAGATCCACAGTTTGATGCCATGC
TTAGCCAAATGGCAGGTCGAATTAGATCAAAGCCTGGAGGAAAACTTGAGATGGGGGAGGCTTCTGTGGTGGAGAGGTATGACAGACCAATGCCGAGGCTACGAAATACA
GATTTAAAATCGAGTAAATACGAGGATCGCCCAGCCCCACCAGGAACTCTAAACGTAGCACAGATGCGCCACATAATTCTCCTGCATGAAGGGAAGGCTGAAGATCATGA
TGGGCCAATGGGAGTTAACCAAATTGCTGAAAGGTATAATGTGGGCGTTGCTCAAATACGGACGATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTCAAGACA
AAAAGAAGGGTTCTAAATAA
mRNA sequenceShow/hide mRNA sequence
CAGTAACACCGAGTCCGGATTCACCGAGTCCACATTTCCTCTCCATTTCCCCCTGAAATTTTTGTCGTAAAACCCTCCGTCTCGTAGGGTTCTTGATTCTTTACGCTTAT
TCTTTGATGAATTTCGTATGAATTTATATCTCTGATTCCAGTTCGTTTTGTGAGATCGTTGTTCGTTTCGAAGAAGGAAGGATGGGACAGGCATTTCGTCGAGCGGCTGG
AAGAATAAAACCGGCTTCGAGTATCGACTCCTCTGCCTCTTCGTTGAAAATGGAGAGCGTCGTAGATCGGAAGCCTCCACCGCGTGCGGCCGAGAAGGCTCGGGAGAGCG
GCGCGCTGGATTCTGGTGACGTCTTGGGAAGTAATTCTGAAAATGTGCTCGAAGAAAGAGATCCACAGTTTGATGCCATGCTTAGCCAAATGGCAGGTCGAATTAGATCA
AAGCCTGGAGGAAAACTTGAGATGGGGGAGGCTTCTGTGGTGGAGAGGTATGACAGACCAATGCCGAGGCTACGAAATACAGATTTAAAATCGAGTAAATACGAGGATCG
CCCAGCCCCACCAGGAACTCTAAACGTAGCACAGATGCGCCACATAATTCTCCTGCATGAAGGGAAGGCTGAAGATCATGATGGGCCAATGGGAGTTAACCAAATTGCTG
AAAGGTATAATGTGGGCGTTGCTCAAATACGGACGATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTCAAGACAAAAAGAAGGGTTCTAAATAACAGGTTTTT
ATTTACTTATTTATTTATTTGTTTGTTGGGACTGAGATTTTGATTTTGGTTTTTCTGTACTAAAATTTGGATGTCGTTTTTAACATGCTGAAACTGCTTTCAGGAATCGA
GCCAAGAAAACAAAGAGGCATTTTCTCCTCGAGCTTTTTAAAATAAAGGTTTTTATAATTCTCTTCTAATTTTTCTCTTCTTAATTATATTTATTGTCTTAACTTATTTT
GTATGGGTTTAATTTCAAGTTTAGTCCTCGAGTTTATGCCTTTTTATTTACCAATCAGATTAGTAAACTTTCAATTTTGTTTTCCGTAGATCTCTAAACTCTATAAAGTA
TAATTTATTTTTAATAAGGTTATGACTTTAGATTCAAAAATAAAAT
Protein sequenceShow/hide protein sequence
MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNT
DLKSSKYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDSLQDKKKGSK