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Carg05502 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05502
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 33
Genome locationCarg_Chr17:1846541..1846918
RNA-Seq ExpressionCarg05502
SyntenyCarg05502
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575064.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]7.8e-6198.43Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSATA  FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

KAG7013637.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-62100Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGAS
        MGISRVSALIAAFAVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGAS
Subjt:  MGISRVSALIAAFAVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGAS

Query:  YYNCRPGAQANPYTRGCSAITRCRS
        YYNCRPGAQANPYTRGCSAITRCRS
Subjt:  YYNCRPGAQANPYTRGCSAITRCRS

XP_022959207.1 protein RALF-like 33 [Cucurbita moschata]3.0e-6097.64Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSA A  FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]1.2e-5896.06Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLI SATA  FSGDNEILFAPTKSECRGSI ECFLAGN DDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

XP_023547686.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]4.3e-5996.06Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAF VLAAHFLI SATA  FSGDNEILFAPTKSECRGSIAECFLAGN+DDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A6J1C9N4 protein RALF-like 338.2e-4880.31Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        M ISRVS+L+AAFA+ AAH L+ SATA  FSGD+++L+ P KSECRGSIAEC LAG  DDSGFG EFEMDSEINRRILAT RYISYGAL+RN+VPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1EV64 protein RALF-like 334.5e-4674.8Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        M ISRV + +AA A++AAHFL+ SA A  FSG +++LF P +S+CRGSIAECFLAG+D+DS FGMEFEMDSEINRRILA++RY+SYGAL+RN+VPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1H3W7 protein RALF-like 331.4e-6097.64Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSA A  FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1KG89 protein RALF-like 332.6e-4674.8Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        M ISRV + +AA A++AAHFL+ SA    FSGD+++LF P +S+CRGSIAECFLAG+D+DS FGMEFEMDSEINRRILA +RY+SYGAL+RN+VPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1KVY0 protein RALF-like 336.0e-5996.06Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLI SATA  FSGDNEILFAPTKSECRGSI ECFLAGN DDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 338.4e-3466.67Show/hide
Query:  AVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY
        A+L  HFL  + T+ S  +   F P +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALRRN VPCSRRGASYYNCR GAQANPY
Subjt:  AVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY

Query:  TRGCSAITRCR
        +RGCSAITRCR
Subjt:  TRGCSAITRCR

Q945T0 Rapid alkalinization factor1.4e-2858.04Show/hide
Query:  VLAAHFLILSATAFSGDNE-ILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY
        ++ A F+ ++A   SG  + ++ A +   C+GSI EC             EFE+DSE NRRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPY
Subjt:  VLAAHFLILSATAFSGDNE-ILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY

Query:  TRGCSAITRCRS
        +RGCSAITRCRS
Subjt:  TRGCSAITRCRS

Q9LUS7 Rapid alkalinization factor 231.4e-3360.14Show/hide
Query:  GISRVSALIAAFA---VLAAH----FLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A FA   +LA H     +   +T F+GD    F P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSALIAAFA---VLAAH----FLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA

Query:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
        LRRN +PCSRRGASYYNCR GAQANPY+RGCSAITRCR
Subjt:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR

Q9MA62 Protein RALF-like 222.5e-2553.72Show/hide
Query:  AAFAVLAAHFLILSATAFSGD--NEILFAPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN
        A +AV+A   +++SA   +GD  + + F    S      C GSIAEC             E E DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYN
Subjt:  AAFAVLAAHFLILSATAFSGD--NEILFAPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN

Query:  CRPGAQANPYTRGCSAITRCR
        C+ GAQANPY+RGCS ITRCR
Subjt:  CRPGAQANPYTRGCSAITRCR

Q9SRY3 Protein RALF-like 13.8e-2664.36Show/hide
Query:  ATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
        A A +GDN        S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPY+RGCS I RCR
Subjt:  ATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR

Query:  S
        S
Subjt:  S

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 12.7e-2764.36Show/hide
Query:  ATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
        A A +GDN        S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPY+RGCS I RCR
Subjt:  ATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR

Query:  S
        S
Subjt:  S

AT2G33775.1 ralf-like 193.9e-1867.74Show/hide
Query:  MEFEMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC
        +++ MDSE NRR LA  R YISYGALR+NNVPCSRRG SYY+C+   +ANPY RGCS IT C
Subjt:  MEFEMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC

AT3G05490.1 ralf-like 221.8e-2653.72Show/hide
Query:  AAFAVLAAHFLILSATAFSGD--NEILFAPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN
        A +AV+A   +++SA   +GD  + + F    S      C GSIAEC             E E DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYN
Subjt:  AAFAVLAAHFLILSATAFSGD--NEILFAPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN

Query:  CRPGAQANPYTRGCSAITRCR
        C+ GAQANPY+RGCS ITRCR
Subjt:  CRPGAQANPYTRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 231.0e-3460.14Show/hide
Query:  GISRVSALIAAFA---VLAAH----FLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A FA   +LA H     +   +T F+GD    F P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSALIAAFA---VLAAH----FLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA

Query:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
        LRRN +PCSRRGASYYNCR GAQANPY+RGCSAITRCR
Subjt:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR

AT4G15800.1 ralf-like 336.0e-3566.67Show/hide
Query:  AVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY
        A+L  HFL  + T+ S  +   F P +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALRRN VPCSRRGASYYNCR GAQANPY
Subjt:  AVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY

Query:  TRGCSAITRCR
        +RGCSAITRCR
Subjt:  TRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCTTCTCCGGCGACAACGAGATTCTCTTTGC
TCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCC
GAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCG
AATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCTTCTCCGGCGACAACGAGATTCTCTTTGC
TCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCC
GAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCG
AATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA
Protein sequenceShow/hide protein sequence
MGISRVSALIAAFAVLAAHFLILSATAFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQA
NPYTRGCSAITRCRS