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Carg05515 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05515
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein light chain
Genome locationCarg_Chr17:1925118..1927608
RNA-Seq ExpressionCarg05515
SyntenyCarg05515
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013650.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]5.9e-76100Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
        TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_022930226.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]7.7e-5276.71Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGN MVK+VSEDRKP+AVATTGKKIVIKSADMFGDVQKEA+DVAI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_022959519.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]1.1e-5380.14Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_023006429.1 dynein light chain 1, cytoplasmic [Cucurbita maxima]7.0e-5378.77Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGNLMVKSVSEDRKPL +ATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_023513722.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo]3.5e-5277.4Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGN MVKSVSEDRKP+AVATTGKKIVIKSADMFGDVQKEA+DVAI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

TrEMBL top hitse value%identityAlignment
A0A1S3C7T8 Dynein light chain5.4e-5176.71Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGNLMVKSVSEDRKP AV  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1EQC6 Dynein light chain3.7e-5276.71Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGN MVK+VSEDRKP+AVATTGKKIVIKSADMFGDVQKEA+DVAI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1H8A5 Dynein light chain5.2e-5480.14Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1KH59 Dynein light chain4.9e-5276.03Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGN MVK+VSEDRKP+AVATTGKKIVIKSADMFGDVQKEA+D+AI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1L253 Dynein light chain3.4e-5378.77Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        MSNDAKRSIQGNLMVKSVSEDRKPL +ATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic8.9e-2753.04Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV
        +K VIK+ADM  D+Q++AID A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG                             SYVTHET HF+
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV

Query:  YFYLDQKAVLLFKSG
        YFYL Q A+LLFKSG
Subjt:  YFYLDQKAVLLFKSG

Q3MHR3 Dynein light chain 2, cytoplasmic1.5e-2652.17Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV
        +K VIK+ADM  D+Q++A+D A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG                             SYVTHET HF+
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV

Query:  YFYLDQKAVLLFKSG
        YFYL Q A+LLFKSG
Subjt:  YFYLDQKAVLLFKSG

Q78P75 Dynein light chain 2, cytoplasmic1.5e-2652.17Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV
        +K VIK+ADM  D+Q++A+D A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG                             SYVTHET HF+
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV

Query:  YFYLDQKAVLLFKSG
        YFYL Q A+LLFKSG
Subjt:  YFYLDQKAVLLFKSG

Q96FJ2 Dynein light chain 2, cytoplasmic1.5e-2652.17Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV
        +K VIK+ADM  D+Q++A+D A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG                             SYVTHET HF+
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV

Query:  YFYLDQKAVLLFKSG
        YFYL Q A+LLFKSG
Subjt:  YFYLDQKAVLLFKSG

Q9D0M5 Dynein light chain 2, cytoplasmic1.5e-2652.17Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV
        +K VIK+ADM  D+Q++A+D A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG                             SYVTHET HF+
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFV

Query:  YFYLDQKAVLLFKSG
        YFYL Q A+LLFKSG
Subjt:  YFYLDQKAVLLFKSG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein5.1e-0937.8Show/hide
Query:  KDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKS
        K +A  +KK+FD  +GP WHCIVG +FG                             SYVTH T  F+YF +D+  VLLFK+
Subjt:  KDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKS

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.2e-0730.7Show/hide
Query:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSVE--KDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHF
        K +++ +DM   +Q +A+  A  A +   V   K +A +IKKEFD+R+G  W C+VG NFG F                              TH    F
Subjt:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSVE--KDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHF

Query:  VYFYLDQKAVLLFK
        +YF L+    L+FK
Subjt:  VYFYLDQKAVLLFK

AT3G16120.1 Dynein light chain type 1 family protein8.1e-0728.95Show/hide
Query:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSV--EKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHF
        K  ++  DM   +Q +A+ +A  + +   V     +A +IKKEFD+R+G  W C+VG NFG F                              TH    F
Subjt:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSV--EKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPNGKVSLPGPGSSYVTHETNHF

Query:  VYFYLDQKAVLLFK
        +YF+L     L+FK
Subjt:  VYFYLDQKAVLLFK

AT4G15930.1 Dynein light chain type 1 family protein8.3e-3654.79Show/hide
Query:  KRSIQGNLMVKSVSEDRKPL-----AVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA
        K+S+ G    +++ +DR+       A    GK+ VIKSADM  D+QKEAI++AI+AFEK+SVEKD+AE IKKEFDK+HG TWHCIVGRNFG         
Subjt:  KRSIQGNLMVKSVSEDRKPL-----AVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELA

Query:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                            SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  TYSMKVTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG

AT5G20110.1 Dynein light chain type 1 family protein2.7e-1034.29Show/hide
Query:  QGNLMVKSVSEDRKP-LAVATTGKKIVIKSADMFGDVQKEAIDVA---IAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMK
        +G   V  V  D    +  A     + I +ADM G +Q  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FG              
Subjt:  QGNLMVKSVSEDRKP-LAVATTGKKIVIKSADMFGDVQKEAIDVA---IAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMK

Query:  VTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKS
                       S+VTH T  F+YF +D+  VLLFK+
Subjt:  VTQPNGKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAACGATGCTAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTGTCGGAGGATCGGAAACCGCTGGCCGTGGCGACGACTGGCAAGAAAATCGTTATAAA
GAGTGCCGATATGTTTGGTGATGTGCAGAAGGAGGCCATCGATGTTGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAAGATGTAGCAGAGTATATTAAGAAAGAGT
TCGATAAGAGGCATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGAGTTTTTGTTTTCGTTTTTGAGTTGGCAACCTATTCAATGAAGGTCACGCAGCCTAAT
GGAAAAGTGTCCCTTCCTGGCCCAGGGAGTTCATATGTGACCCACGAGACAAACCACTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTATTCAAATCTGGTTG
A
mRNA sequenceShow/hide mRNA sequence
CACGAGTTTTTCTTACAATTTCCAGTCAAATGATGAAGTAATTCCAAATTTCTTGAAACGAAAAAGTTGCAGAGATTGCAAAAAGGTTCCTCTTCTCGCTACCGAATCGG
CACAGAAGATCAGAGAAGAAGAAGAAGAAGAAGAAGCTGAAAATGAGTAACGATGCTAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTGTCGGAGGATCGGAA
ACCGCTGGCCGTGGCGACGACTGGCAAGAAAATCGTTATAAAGAGTGCCGATATGTTTGGTGATGTGCAGAAGGAGGCCATCGATGTTGCCATAGCTGCATTTGAAAAGC
ATAGTGTAGAGAAAGATGTAGCAGAGTATATTAAGAAAGAGTTCGATAAGAGGCATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGAGTTTTTGTTTTCGTT
TTTGAGTTGGCAACCTATTCAATGAAGGTCACGCAGCCTAATGGAAAAGTGTCCCTTCCTGGCCCAGGGAGTTCATATGTGACCCACGAGACAAACCACTTTGTTTACTT
CTACCTGGATCAGAAAGCAGTTTTACTATTCAAATCTGGTTGATAAACATGTATATTATGCAGATTAATGAATAT
Protein sequenceShow/hide protein sequence
MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGVFVFVFELATYSMKVTQPN
GKVSLPGPGSSYVTHETNHFVYFYLDQKAVLLFKSG