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Carg05516 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05516
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:1929183..1932588
RNA-Seq ExpressionCarg05516
SyntenyCarg05516
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575077.1 hypothetical protein SDJN03_25716, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2496.36Show/hide
Query:  MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMNIV
        MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMN++
Subjt:  MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMNIV
KAG7013651.1 hypothetical protein SDJN02_23818, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-71100Show/hide
Query:  MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMNIVPYLVDVSRHLVVKEPILRQSELISEQHYSGSLRNSGPSSRMAVWL
        MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMNIVPYLVDVSRHLVVKEPILRQSELISEQHYSGSLRNSGPSSRMAVWL
Subjt:  MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMNIVPYLVDVSRHLVVKEPILRQSELISEQHYSGSLRNSGPSSRMAVWL

Query:  ACAKTLSVFLPTKSSALIDSSSQSVLKTTIKIETTHAI
        ACAKTLSVFLPTKSSALIDSSSQSVLKTTIKIETTHAI
Subjt:  ACAKTLSVFLPTKSSALIDSSSQSVLKTTIKIETTHAI
TrEMBL top hitse value%identityAlignment
A0A0A0KG99 Uncharacterized protein1.2e-1576.81Show/hide
Query:  ILRQSELISEQHYSG-SLRNSGPSSRMAVWLACAKTLSVFLPTKSSALIDSSSQSVLKTTIKIETTHAI
        IL+Q     ++  +G SLRNSGPSSRMAVW+ACAK L VFLPTKSSALIDS SQSVLKTTIKIETTHAI
Subjt:  ILRQSELISEQHYSG-SLRNSGPSSRMAVWLACAKTLSVFLPTKSSALIDSSSQSVLKTTIKIETTHAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGCGATAATCATAGCTTGTTGAAAACGATTTGGTGTGGTGGACGTCTGTCATATGATGTGAAATTTTCTCACCGAGCTTTGATGAACAATGGCGGATTATGTCG
GGACGAACAATGGAATTCAGATTTTCTGTTGCCAATGGAGTTGATGAATATTGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCGTCAAGGAGCCAATTCTTCGAC
AATCGGAGTTGATAAGCGAACAGCATTATAGCGGTTCTTTGAGAAATTCAGGACCTTCCTCACGTATGGCTGTGTGGCTTGCATGTGCAAAGACGTTATCGGTGTTTTTG
CCTACCAAGTCTTCGGCTTTGATCGACTCCAGTTCCCAATCTGTATTGAAGACCACTATTAAGATTGAGACCACACATGCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGCGATAATCATAGCTTGTTGAAAACGATTTGGTGTGGTGGACGTCTGTCATATGATGTGAAATTTTCTCACCGAGCTTTGATGAACAATGGCGGATTATGTCG
GGACGAACAATGGAATTCAGATTTTCTGTTGCCAATGGAGTTGATGAATATTGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCGTCAAGGAGCCAATTCTTCGAC
AATCGGAGTTGATAAGCGAACAGCATTATAGCGGTTCTTTGAGAAATTCAGGACCTTCCTCACGTATGGCTGTGTGGCTTGCATGTGCAAAGACGTTATCGGTGTTTTTG
CCTACCAAGTCTTCGGCTTTGATCGACTCCAGTTCCCAATCTGTATTGAAGACCACTATTAAGATTGAGACCACACATGCCATCTGA
Protein sequenceShow/hide protein sequence
MPSDNHSLLKTIWCGGRLSYDVKFSHRALMNNGGLCRDEQWNSDFLLPMELMNIVPYLVDVSRHLVVKEPILRQSELISEQHYSGSLRNSGPSSRMAVWLACAKTLSVFL
PTKSSALIDSSSQSVLKTTIKIETTHAI