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Carg05531 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05531
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 6-like
Genome locationCarg_Chr17:2034476..2034835
RNA-Seq ExpressionCarg05531
SyntenyCarg05531
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013666.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-62100Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

KGN47401.1 hypothetical protein Csa_022997 [Cucumis sativus]4.0e-3867.65Show/hide
Query:  MKLFGYSVTAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AGGRSPPPNYE
        MKLFG+SVTAS        +LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S     + GR+PPP Y 
Subjt:  MKLFGYSVTAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AGGRSPPPNYE

Query:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF

XP_022959394.1 zinc finger protein 6-like [Cucurbita moschata]9.7e-6198.32Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSV ASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSA GRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

XP_023006285.1 zinc finger protein 6-like [Cucurbita maxima]1.4e-5996.64Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSVTASAEPSLGAPC NHIKRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSA G SPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

XP_023548316.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]2.6e-6199.16Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSA GRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein1.9e-3867.65Show/hide
Query:  MKLFGYSVTAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AGGRSPPPNYE
        MKLFG+SVTAS        +LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S     + GR+PPP Y 
Subjt:  MKLFGYSVTAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AGGRSPPPNYE

Query:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF

A0A1S3C7Q6 zinc finger protein 6-like2.1e-3767.16Show/hide
Query:  MKLFGYSVTASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPSAG----GRSPPPNYEM
        MKLFG+SVTAS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNFFT TPP + G    GR+PPP   +
Subjt:  MKLFGYSVTASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPSAG----GRSPPPNYEM

Query:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI
         V+A P+ VGGG+++ E+NGVDLHLSLAPSS RI
Subjt:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI

A0A5D3BTX6 Zinc finger protein 6-like2.1e-3767.16Show/hide
Query:  MKLFGYSVTASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPSAG----GRSPPPNYEM
        MKLFG+SVTAS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNFFT TPP + G    GR+PPP   +
Subjt:  MKLFGYSVTASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPSAG----GRSPPPNYEM

Query:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI
         V+A P+ VGGG+++ E+NGVDLHLSLAPSS RI
Subjt:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI

A0A6J1H7Y0 zinc finger protein 6-like4.7e-6198.32Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSV ASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSA GRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

A0A6J1KZQ7 zinc finger protein 6-like6.8e-6096.64Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSVTASAEPSLGAPC NHIKRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSA G SPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 51.1e-0945.71Show/hide
Query:  MKLFGYSVTA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL
        +KLFG+ + +           S   S        +KR +CQ+CG+EFANSQALGGHQNAHK+ER   K+L
Subjt:  MKLFGYSVTA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL

Q39265 Zinc finger protein 65.1e-1236.92Show/hide
Query:  MKLFGYSV-------TASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAGGRSPPPNYEMP
        +KLFG ++         S+EP  G+   +  ++++CQ+C REFANSQALGGHQNAHK+ERQL K+        LPR+  F P   P     +P P+    
Subjt:  MKLFGYSV-------TASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAGGRSPPPNYEMP

Query:  VEAPPSVGGGEINGENNGVDLHLSLAPSST
           PP                H+ L+PSS+
Subjt:  VEAPPSVGGGEINGENNGVDLHLSLAPSST

Q84WI0 Zinc finger protein GIS5.2e-0949.32Show/hide
Query:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGG
        +H +RF+C +C R F  SQALGGHQNAHKRERQLAK+ +   F+ P   P +  R  P     P+ A  S GG
Subjt:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGG

Q9C9H1 Zinc finger protein GIS39.9e-0867.65Show/hide
Query:  KRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        ++++CQ+C REF NSQALGGHQNAHK+ERQ  K+
Subjt:  KRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ

Q9FG05 Zinc finger protein GIS25.8e-0847.06Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        ++LFG+   AS E S      N            KRF+C +C R F  SQALGGHQNAHKRERQ  K+
Subjt:  MKLFGYSVTASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 57.5e-1145.71Show/hide
Query:  MKLFGYSVTA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL
        +KLFG+ + +           S   S        +KR +CQ+CG+EFANSQALGGHQNAHK+ER   K+L
Subjt:  MKLFGYSVTA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL

AT1G67030.1 zinc finger protein 63.6e-1336.92Show/hide
Query:  MKLFGYSV-------TASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAGGRSPPPNYEMP
        +KLFG ++         S+EP  G+   +  ++++CQ+C REFANSQALGGHQNAHK+ERQL K+        LPR+  F P   P     +P P+    
Subjt:  MKLFGYSV-------TASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAGGRSPPPNYEMP

Query:  VEAPPSVGGGEINGENNGVDLHLSLAPSST
           PP                H+ L+PSS+
Subjt:  VEAPPSVGGGEINGENNGVDLHLSLAPSST

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein3.7e-1049.32Show/hide
Query:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGG
        +H +RF+C +C R F  SQALGGHQNAHKRERQLAK+ +   F+ P   P +  R  P     P+ A  S GG
Subjt:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGG

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein4.1e-0947.06Show/hide
Query:  MKLFGYSVTASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        ++LFG+   AS E S      N            KRF+C +C R F  SQALGGHQNAHKRERQ  K+
Subjt:  MKLFGYSVTASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein5.4e-0954Show/hide
Query:  TASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        T    PS     +   K F C +C R F +SQALGGHQNAHKRER LAK+
Subjt:  TASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGTTTGGTTATTCAGTGACCGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGC
CAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCG
GCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTC
GCACCGTCCTCGACCAGGATCTTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGTTTGGTTATTCAGTGACCGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGC
CAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCG
GCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTC
GCACCGTCCTCGACCAGGATCTTCTCTTAA
Protein sequenceShow/hide protein sequence
MKLFGYSVTASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAGGRSPPPNYEMPVEAPPSVGGGEINGENNGVDLHLSL
APSSTRIFS