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Carg05554 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05554
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:2177752..2178225
RNA-Seq ExpressionCarg05554
SyntenyCarg05554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575119.1 hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]2.0e-51100Show/hide
Query:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
        MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
Subjt:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYEP
        YFSSDKPYEP
Subjt:  YFSSDKPYEP

KAG6594018.1 hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2160Show/hide
Query:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
        MMK+ L+L  V LLLV  DA MH V++KK ARKLA+S  GQ  P+T VF GV     ED +V        ++  NNN D+DDENLGYKNYGKGSDTETHR
Subjt:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYEP
        YFSS+KPY P
Subjt:  YFSSDKPYEP

KAG7013689.1 hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-63100Show/hide
Query:  MFPFVLLHPISLNTKQITSHMMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDD
        MFPFVLLHPISLNTKQITSHMMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDD
Subjt:  MFPFVLLHPISLNTKQITSHMMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDD

Query:  DDENLGYKNYGKGSDTETHRYFSSDKPYEP
        DDENLGYKNYGKGSDTETHRYFSSDKPYEP
Subjt:  DDENLGYKNYGKGSDTETHRYFSSDKPYEP

TYK02960.1 uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]3.3e-2260.91Show/hide
Query:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
        MMK+VL+L  V LLL+M DAAM  VVEKK ARKLA+  G +  P+ EVF+   E   +  +V     V  NIDN++N +DDD NLGYKNYGKGSDTETHR
Subjt:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYEP
        YFSSDKPY P
Subjt:  YFSSDKPYEP

XP_004150985.1 uncharacterized protein LOC101207042 [Cucumis sativus]1.7e-1856.36Show/hide
Query:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
        MMK+VL+L    LLL+M DA    +VEKK ARKLA+    + TP+  VF+   E   E+ + V   DVV N + N++ +DDD NLGYKNYGKGSDTETHR
Subjt:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYEP
        YFSSDKPY P
Subjt:  YFSSDKPYEP

TrEMBL top hitse value%identityAlignment
A0A0A0KGD6 Uncharacterized protein8.3e-1956.36Show/hide
Query:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
        MMK+VL+L    LLL+M DA    +VEKK ARKLA+    + TP+  VF+   E   E+ + V   DVV N + N++ +DDD NLGYKNYGKGSDTETHR
Subjt:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYEP
        YFSSDKPY P
Subjt:  YFSSDKPYEP

A0A5D3BV16 Uncharacterized protein1.6e-2260.91Show/hide
Query:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR
        MMK+VL+L  V LLL+M DAAM  VVEKK ARKLA+  G +  P+ EVF+   E   +  +V     V  NIDN++N +DDD NLGYKNYGKGSDTETHR
Subjt:  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYEP
        YFSSDKPY P
Subjt:  YFSSDKPYEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCCTTTGTCCTCCTCCACCCCATATCCTTAAATACCAAACAAATAACAAGTCATATGATGAAGAAGGTGCTCGTTCTCTTAGTTGTTTCGTTGCTTCTCGTGAT
GGGAGATGCTGCGATGCACGGTGTGGTCGAGAAGAAGCATGCACGTAAGCTAGCTCGAAGCTTAGGTGGCCAAACAACTCCTGAAACGGAAGTGTTCAGTGGTGTATATG
AGCATGGACCTGAAGATGTCGAAGTTGTTGTTGTTGCTGATGTTGTAACTAATATCGACAATAACAATAACGTAGACGATGATGATGAAAATCTAGGTTATAAAAATTAC
GGAAAAGGTTCTGACACCGAAACTCATCGTTACTTCTCAAGTGACAAACCATACGAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCCCTTTGTCCTCCTCCACCCCATATCCTTAAATACCAAACAAATAACAAGTCATATGATGAAGAAGGTGCTCGTTCTCTTAGTTGTTTCGTTGCTTCTCGTGAT
GGGAGATGCTGCGATGCACGGTGTGGTCGAGAAGAAGCATGCACGTAAGCTAGCTCGAAGCTTAGGTGGCCAAACAACTCCTGAAACGGAAGTGTTCAGTGGTGTATATG
AGCATGGACCTGAAGATGTCGAAGTTGTTGTTGTTGCTGATGTTGTAACTAATATCGACAATAACAATAACGTAGACGATGATGATGAAAATCTAGGTTATAAAAATTAC
GGAAAAGGTTCTGACACCGAAACTCATCGTTACTTCTCAAGTGACAAACCATACGAACCTTAA
Protein sequenceShow/hide protein sequence
MFPFVLLHPISLNTKQITSHMMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNY
GKGSDTETHRYFSSDKPYEP