; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05589 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05589
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCarg_Chr17:2519218..2520249
RNA-Seq ExpressionCarg05589
SyntenyCarg05589
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-134100Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
        LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI

Query:  TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYFPKL
        TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYFPKL
Subjt:  TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYFPKL

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]1.1e-7970.51Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLV+L+QFEPL+DATSLL Q++KDADV+FT  ML +I S+ SP+FVATLQ+S RLFTN+SVDH  SSKVSL+ FHDAMLDGGSFSSM+IH+L++  QM+
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
        LR+E PS + PPLH EL LSPPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TKE G+C+IVGYEGE ET+L +
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI

Query:  TFRPMMFFLNFTYKANR
          RPMMFFLNFTY+AN+
Subjt:  TFRPMMFFLNFTYKANR

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]3.0e-7261.26Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKD-ADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQM
        MFLV+L+ F+PLLDATS L QIS D AD++FT     +IASH SPRF+ATLQ+S + FT +SVD+ +SSKVSLESFHDA+LDGGSF+SM+IH+L+   QM
Subjt:  MFLVQLQQFEPLLDATSLLTQISKD-ADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQM

Query:  ILRYENPSSNDPPLHLELPLSPPQAE--SLGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGED
        ILR++ PSS   PLH EL LSPPQAE   +GQ E    K+F V SK LR+IIK+LP+F +D ++ V  T++RVKFSIASKEI +T E  +C+I G+E E 
Subjt:  ILRYENPSSNDPPLHLELPLSPPQAE--SLGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGED

Query:  ETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP
        ET+  I   PMMFFLNFTYKANRVWFYKT  N+ +++ VPA+G++GQYV+YFP
Subjt:  ETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]2.0e-6858.89Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQIS-KDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQM
        MFLV+L +FEPLLD+T  L   S  +A V+FT   L LI S+  P F+ATLQ+S R FTN+SVDH +SSKVSLESFHDAMLDGG FS+MSIH+L+   QM
Subjt:  MFLVQLQQFEPLLDATSLLTQIS-KDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQM

Query:  ILRYENPSSNDPPLHLELPLSPPQAES--LGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGED
        ILR++ PSS   PLH EL LSPPQ+E   +GQ E    KFF V SK LR++IKELP+F +D ++ V  T++++KFSIAS +I V  E  +CRI G+E E 
Subjt:  ILRYENPSSNDPPLHLELPLSPPQAES--LGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGED

Query:  ETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP
        ET+  I   PM+FFLNFTY+A+RVWFYKT  N+ +V+ VPAFG+YGQY +YFP
Subjt:  ETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]1.4e-7764.54Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLV+L  FEPLLDATS L QIS  ADV+FT     LIA + SPRFVATLQ+S + FTNYSVDH ++SKV LESFHDA+LDGGSF+SM+IH+LE   QMI
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESL---GQVEYGKFFTVNSKVLRKIIKELPLFHDD-LVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDET
        LR++ PSS  PPLH EL  SPPQ       GQ+E GKFF V S+ LR+IIKELP+F DD +V V  TS+++KFSIASKEI +  ++ +CRIVG+E E ET
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESL---GQVEYGKFFTVNSKVLRKIIKELPLFHDD-LVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDET

Query:  ELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP
        +  I  RPM+FFLNFTYKAN+VWFYKT  NS SV++VPAFG+ GQYV+YFP
Subjt:  ELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980105.5e-8070.51Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLV+L+QFEPL+DATSLL Q++KDADV+FT  ML +I S+ SP+FVATLQ+S RLFTN+SVDH  SSKVSL+ FHDAMLDGGSFSSM+IH+L++  QM+
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
        LR+E PS + PPLH EL LSPPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TKE G+C+IVGYEGE ET+L +
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI

Query:  TFRPMMFFLNFTYKANR
          RPMMFFLNFTY+AN+
Subjt:  TFRPMMFFLNFTYKANR

A0A1S3CL88 uncharacterized protein LOC1035022501.5e-7261.26Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKD-ADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQM
        MFLV+L+ F+PLLDATS L QIS D AD++FT     +IASH SPRF+ATLQ+S + FT +SVD+ +SSKVSLESFHDA+LDGGSF+SM+IH+L+   QM
Subjt:  MFLVQLQQFEPLLDATSLLTQISKD-ADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQM

Query:  ILRYENPSSNDPPLHLELPLSPPQAE--SLGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGED
        ILR++ PSS   PLH EL LSPPQAE   +GQ E    K+F V SK LR+IIK+LP+F +D ++ V  T++RVKFSIASKEI +T E  +C+I G+E E 
Subjt:  ILRYENPSSNDPPLHLELPLSPPQAE--SLGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGED

Query:  ETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP
        ET+  I   PMMFFLNFTYKANRVWFYKT  N+ +++ VPA+G++GQYV+YFP
Subjt:  ETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFP

A0A6J1H2Z8 uncharacterized protein LOC1114600111.0e-5749.8Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLV+L  F+PL++ATS+L QIS +AD++F++   SLI S+ S RFVAT Q+S R F NY VD  +SS+VSL+SF++AM  G  FSSM+IH  E+  +M+
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
        L++E+ +     +H  L LSP Q E LGQ+++ +FF++ S+  R II  LP F ++ + V+ TS+RVKF  AS+E  +TKE G C IVGYEG+ E    I
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI

Query:  TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYF
           P  FF N +Y A R+WFYKT +S+ VI +PAFG+  QYV+YF
Subjt:  TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYF

A0A6J1KIW5 uncharacterized protein LOC1114948745.7e-6149.8Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLV+L+ F PL+D TS L QI++++D+ FT   L L  S  SPRF+ATLQ+  + FT YSV+  + S++SLES HDA+LD GS S+M+IH+LE+   M+
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
        LR+E P +++P L  +  L PPQ +S+ ++EY K   ++S+ LR++IKELPLFH D V V  TS+RV+FSIAS+E+   KE G C I+G++G+  TE  I
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI

Query:  TFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFPKL
           PM+FFLN TY    VWF+KT TN+  V+  P F ++ QYV+YFP++
Subjt:  TFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYGQYVVYFPKL

A0A6J1KZ05 uncharacterized protein LOC1114988871.7e-6051.84Show/hide
Query:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI
        MFLV+L  F+PL +ATSLL QIS +AD++F++   SLI S+ S RFVAT Q+S R F NYSVD  +SS+VSL+SF+DAM DG  FSSM+IH  E+  +M+
Subjt:  MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMI

Query:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI
        L++E+ +     +H  L LSP Q E LGQ+++ +FF++ S+  R II  LP F ++ + V+ TS+RVKF  AS+E  +TKE G C I+GYEGE E    I
Subjt:  LRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHI

Query:  TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYF
           P  FF N +Y A R+WFYKT +S+ VI VPAFG+  QYV+YF
Subjt:  TFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTT
AATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGT
CCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGCAATGAC
CCACCATTGCATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTAT
AAAAGAATTGCCTCTCTTCCACGATGATTTAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGAGTGGAA
ATTGTAGGATCGTAGGTTATGAAGGAGAAGATGAAACTGAGCTGCATATCACTTTTCGTCCCATGATGTTTTTCCTTAATTTTACGTATAAAGCGAATAGGGTTTGGTTT
TATAAGACAACTAATTCTCAAAGTGTAATTAGTGTCCCAGCTTTTGGGATGTATGGTCAATATGTGGTCTATTTTCCCAAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTT
AATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGT
CCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGCAATGAC
CCACCATTGCATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTAT
AAAAGAATTGCCTCTCTTCCACGATGATTTAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGAGTGGAA
ATTGTAGGATCGTAGGTTATGAAGGAGAAGATGAAACTGAGCTGCATATCACTTTTCGTCCCATGATGTTTTTCCTTAATTTTACGTATAAAGCGAATAGGGTTTGGTTT
TATAAGACAACTAATTCTCAAAGTGTAATTAGTGTCCCAGCTTTTGGGATGTATGGTCAATATGTGGTCTATTTTCCCAAATTATGA
Protein sequenceShow/hide protein sequence
MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSND
PPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWF
YKTTNSQSVISVPAFGMYGQYVVYFPKL