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Carg05594 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05594
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:2583110..2585664
RNA-Seq ExpressionCarg05594
SyntenyCarg05594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013728.1 hypothetical protein SDJN02_23895, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-120100Show/hide
Query:  MPPEKPHQLACHAIQQALVLPFSSIYSCLRGDTILQPMDFRVELESVTKSDTTSTNHPTTKASYHILHRSQLVVQSAAAAAAVAPGEAALHWEGDGMSVS
        MPPEKPHQLACHAIQQALVLPFSSIYSCLRGDTILQPMDFRVELESVTKSDTTSTNHPTTKASYHILHRSQLVVQSAAAAAAVAPGEAALHWEGDGMSVS
Subjt:  MPPEKPHQLACHAIQQALVLPFSSIYSCLRGDTILQPMDFRVELESVTKSDTTSTNHPTTKASYHILHRSQLVVQSAAAAAAVAPGEAALHWEGDGMSVS

Query:  IQFYRLKTDSLRSLELSVSLIGVQMQLEPEKDSFLQKIPLQEKKTFRVKEEGGGVSPVGFNGSFSRGSRERDEEDENQVEVEVEVHLCLEEECFGREDGE
        IQFYRLKTDSLRSLELSVSLIGVQMQLEPEKDSFLQKIPLQEKKTFRVKEEGGGVSPVGFNGSFSRGSRERDEEDENQVEVEVEVHLCLEEECFGREDGE
Subjt:  IQFYRLKTDSLRSLELSVSLIGVQMQLEPEKDSFLQKIPLQEKKTFRVKEEGGGVSPVGFNGSFSRGSRERDEEDENQVEVEVEVHLCLEEECFGREDGE

Query:  EREVRKRVELSEFQYRSYLYFFKKIIEF
        EREVRKRVELSEFQYRSYLYFFKKIIEF
Subjt:  EREVRKRVELSEFQYRSYLYFFKKIIEF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCGGAAAAGCCTCATCAGCTTGCGTGCCATGCCATACAGCAAGCATTAGTTCTCCCTTTTTCTTCGATCTACTCTTGTCTTCGAGGCGATACCATTCTGCAGCC
AATGGACTTTCGGGTGGAACTCGAGTCTGTTACCAAGAGCGACACGACCTCGACCAACCATCCCACCACCAAGGCCTCATACCATATCCTCCATAGGTCACAGCTGGTGG
TACAATCTGCTGCTGCTGCTGCTGCTGTTGCTCCAGGGGAGGCTGCTTTGCATTGGGAAGGTGATGGAATGTCTGTCTCGATCCAGTTTTATCGCTTGAAAACAGACTCG
CTACGAAGTTTGGAACTTTCTGTGTCGTTGATTGGTGTTCAGATGCAATTGGAACCAGAAAAGGATTCTTTTCTACAGAAGATTCCACTGCAGGAAAAGAAAACGTTCCG
AGTCAAAGAAGAAGGTGGAGGAGTCTCTCCGGTTGGCTTTAATGGAAGTTTTTCGAGAGGATCAAGGGAAAGAGATGAAGAGGATGAAAATCAAGTTGAAGTTGAAGTTG
AAGTTCATCTCTGTTTGGAAGAGGAATGTTTTGGGAGAGAAGACGGAGAGGAAAGAGAGGTACGAAAGAGAGTTGAATTGTCTGAGTTTCAATATCGTTCATATTTGTAT
TTTTTCAAAAAAATAATTGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCGGAAAAGCCTCATCAGCTTGCGTGCCATGCCATACAGCAAGCATTAGTTCTCCCTTTTTCTTCGATCTACTCTTGTCTTCGAGGCGATACCATTCTGCAGCC
AATGGACTTTCGGGTGGAACTCGAGTCTGTTACCAAGAGCGACACGACCTCGACCAACCATCCCACCACCAAGGCCTCATACCATATCCTCCATAGGTCACAGCTGGTGG
TACAATCTGCTGCTGCTGCTGCTGCTGTTGCTCCAGGGGAGGCTGCTTTGCATTGGGAAGGTGATGGAATGTCTGTCTCGATCCAGTTTTATCGCTTGAAAACAGACTCG
CTACGAAGTTTGGAACTTTCTGTGTCGTTGATTGGTGTTCAGATGCAATTGGAACCAGAAAAGGATTCTTTTCTACAGAAGATTCCACTGCAGGAAAAGAAAACGTTCCG
AGTCAAAGAAGAAGGTGGAGGAGTCTCTCCGGTTGGCTTTAATGGAAGTTTTTCGAGAGGATCAAGGGAAAGAGATGAAGAGGATGAAAATCAAGTTGAAGTTGAAGTTG
AAGTTCATCTCTGTTTGGAAGAGGAATGTTTTGGGAGAGAAGACGGAGAGGAAAGAGAGGTACGAAAGAGAGTTGAATTGTCTGAGTTTCAATATCGTTCATATTTGTAT
TTTTTCAAAAAAATAATTGAATTTTAAGTATAAGTTAAATGACGTGTAAATCACCCATTGGTGGAATTGCGTACTGGATTTCCTCTCGCGCCTAACAGCTTTCCTTGAGA
GTTTCAATAATTTCTAAAACTTACTGCTGTCAGCTTTTACTTTTTACTTTTTTACGTACCGCATTCGGCTTCATGATTTTACACTCTTGTAAGGAATGTTTTGTTTTCTC
ATTCTCCACACTAACCGACGTGGGATCTTACAATTCGCTTTCCTTGTGGGTCAGCGTTCTCGTTGGCACACT
Protein sequenceShow/hide protein sequence
MPPEKPHQLACHAIQQALVLPFSSIYSCLRGDTILQPMDFRVELESVTKSDTTSTNHPTTKASYHILHRSQLVVQSAAAAAAVAPGEAALHWEGDGMSVSIQFYRLKTDS
LRSLELSVSLIGVQMQLEPEKDSFLQKIPLQEKKTFRVKEEGGGVSPVGFNGSFSRGSRERDEEDENQVEVEVEVHLCLEEECFGREDGEEREVRKRVELSEFQYRSYLY
FFKKIIEF