CuGenDBv2

Gene ID	Carg05597
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	shootin-1-like
Genome location	Carg_Chr17:2598785..2602837
RNA-Seq Expression	Carg05597
Synteny	Carg05597
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575171.1 hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sororia]

8.4e-105

99.51

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKT EFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

KAG7013731.1 hypothetical protein SDJN02_23898 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-105

100

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

XP_022959506.1 uncharacterized protein LOC111460466 [Cucurbita moschata]

3.2e-104

99.02

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKT EFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEK GANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

XP_023006667.1 uncharacterized protein LOC111499323 [Cucurbita maxima]

3.9e-102

97.06

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKA QSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKT EFRNCKAANEIRERIKLLQDMYI+MMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTSNVLDGQS+SVDNQDQRSREQ+HDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR+KNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

XP_023548253.1 uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo]

6.0e-103

98.04

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKT EFRNCKAANEIRERIKLLQDMYI+MMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTS VLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR+KNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F0 Uncharacterized protein

2.1e-69

74.15

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEE KA        +TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFLEV+KT +FRNCKAA EIRERIK+LQD+Y MMMA TSE+LY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKT-SNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPI
        IEKT SNVLDG           +REQHHDG  G KSSTKSYESN+PSS+APEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI
Subjt:  IEKT-SNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPI

Query:  VSSES
         SSES
Subjt:  VSSES

A0A1S3C7F7 uncharacterized protein LOC103497729

1.7e-71

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEE K    A +PP+TAPSQ    LPPLPPK KKRPLDRNAY+Q+TKMRAVIRDLRPHFLEV+KT +FRNCKAA EIRERIK+LQDMY  MM+ TSE+LY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKT NVLDG           +REQHHDGK G KSSTKSYESN+PSS+APEKQ ANDG  SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI 
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

A0A6J1DSC5 uncharacterized protein LOC111023072

1.1e-70

73.66

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIK   S P P +TAPS PT PLPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK  +FRNCKAANEIRERIKLLQDMY +MMA+T+E+LY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQD-QRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPI
        IEKT+N+LDGQSLSVDNQD +R RE HHD K G KSS +SYESN+      EKQ  NDG +SG YIVGGSAFGWNFI F G EPVYYGVTKE +R+KNPI
Subjt:  IEKTSNVLDGQSLSVDNQD-QRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPI

Query:  VSSES
        VSSES
Subjt:  VSSES

A0A6J1H517 uncharacterized protein LOC111460466

1.5e-104

99.02

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKT EFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEK GANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

A0A6J1KWG6 uncharacterized protein LOC111499323

1.9e-102

97.06

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Query:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        MEEIKA QSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKT EFRNCKAANEIRERIKLLQDMYI+MMATTSESLY
Subjt:  MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV
        IEKTSNVLDGQS+SVDNQDQRSREQ+HDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR+KNPIV
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIV

Query:  SSES
        SSES
Subjt:  SSES

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G01730.1 unknown protein

2.6e-19

36.89

Show/hide

Query:  QSAPLPPSTAPSQPTPPLPPLPPKP----KKRPLDRNAYIQ---YTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY
        +SA LP    P+Q T P   +   P    +KR L+ N  I+   Y KMR +++DLRPH LEVL+T + RN KA  EI+E++KL+  +Y  M+    ES  
Subjt:  QSAPLPPSTAPSQPTPPLPPLPPKP----KKRPLDRNAYIQ---YTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLY

Query:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAF--TGTEPVYYGVTKEEFRKKNP
         EKT+                      D    GK++T +  +      +  ++ ++DG   G  +VGGSAFGWNFI     GTEPVY G++KEE+R  +P
Subjt:  IEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAF--TGTEPVYYGVTKEEFRKKNP

Query:  IVSSES
        I+  E+
Subjt:  IVSSES

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACT
CGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAG
CTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGT
CAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAG
TCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGG
TATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGA

mRNA sequence

Show/hide mRNA sequence

AAAACCCTTCCTTCAGGATTCGAGGTCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCC
GCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTC
TCGAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCA
GAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGG
CAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGG
CATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGATCT
GGAACACTTAGAAAAGTAGTATGCTGGGGAAATCTTCTTTGTTATGGTAAGTTTAGAAGAGCATTCAATAGATGAAATAGCTTCCTTCTATTTCTAGTGTGACTATACAA
TGTATTAGTTTTTAAGTATGAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTT
ATTAATCCTGATGATAATTTTATGTAGTCAAAGATATTATTCAAGCCCAATTAGAAGATATTGCTTGTTTTGGTTCATTATGTATCGTCGTCAGCCTCATAGTTTTAAAA
CGCGGCTAAAGAGAGGTTTTCATACTCTTATAAGGACCCCTCTTTGGA

Protein sequence

Show/hide protein sequence

MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDG
QSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES

Carg05597 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome