CuGenDBv2

Gene ID	Carg05601
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr17:2616531..2618339
RNA-Seq Expression	Carg05601
Synteny	Carg05601
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021013 - ATPase, vacuolar ER assembly factor, Vma12

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7013735.1 hypothetical protein SDJN02_23902, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.5e-62

100

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Query:  MINDQAHPSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGML
        MINDQAHPSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGML
Subjt:  MINDQAHPSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGML

Query:  VETLLFIIRASSYDNRSSSSSRSKLKKNQ
        VETLLFIIRASSYDNRSSSSSRSKLKKNQ
Subjt:  VETLLFIIRASSYDNRSSSSSRSKLKKNQ

XP_004138504.1 uncharacterized protein LOC101222938 [Cucumis sativus]

9.5e-54

95.08

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IR+S+YDNRSSSSSRSKLKK+Q
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

XP_022959366.1 uncharacterized protein LOC111460360 [Cucurbita moschata]

5.1e-55

97.54

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IRASSYDNRSSSSSRSKLKKNQ
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

XP_023006665.1 uncharacterized protein LOC111499322 [Cucurbita maxima]

5.6e-54

95.9

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLK LADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IRASSYDNRSSSSSRSKLKKNQ
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

XP_023548168.1 uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]

6.6e-55

96.72

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKP+DEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IRASSYDNRSSSSSRSKLKKNQ
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F5 Uncharacterized protein

4.6e-54

95.08

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IR+S+YDNRSSSSSRSKLKK+Q
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

A0A1S3C6X8 uncharacterized protein LOC103497719

1.0e-53

94.26

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IR+S+YDNRSSSSSRSKLKK+Q
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

A0A5D3BV73 Uncharacterized protein

1.0e-53

94.26

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IR+S+YDNRSSSSSRSKLKK+Q
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

A0A6J1H4N6 uncharacterized protein LOC111460360

2.4e-55

97.54

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IRASSYDNRSSSSSRSKLKKNQ
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

A0A6J1L0S3 uncharacterized protein LOC111499322

2.7e-54

95.9

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELKARLK LADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSSRSKLKKNQ
        IRASSYDNRSSSSSRSKLKKNQ
Subjt:  IRASSYDNRSSSSSRSKLKKNQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52980.1 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

7.8e-38

71.93

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Query:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI
        P   SEELK RL KL ++AERK Y ELVKDI PKK ++EPFSSYKDQLGFGLHV L MFTGYLVGYA FRALF  +P +SAAGGILGLV  MLVETLLFI
Subjt:  PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFI

Query:  IRASSYDNRSSSSS
        I+ S  D   SS S
Subjt:  IRASSYDNRSSSSS

Sequences

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CDS sequence

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mRNA sequence

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ATGATCAACGACCAGGCGCATCCGTCTGGTCTTAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGA
TATCGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTTGGGTTCGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATG
CTTTATTCCGAGCATTGTTTAGGCACGATCCGATCATGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTCGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCA
TCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAGAGTTACTTCTCTTGAGGTTTGCTTTCTTTCTACTTAAATTGAACCTATTA
GGTTAGCTTTTACCCTATGTTGTGGATCAAAGTAATAAGGGCCTTGCTAATGTGCTTGCTGTAATTTGTTTGTATAAAGTCGTGTTCTTCTGGTGAAGAACATCAAAAGA
ATTGAGATCCGATTGTTCATCTCAGGAGATGAAT

Protein sequence

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MINDQAHPSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRA
SSYDNRSSSSSRSKLKKNQ

Carg05601 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome