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Carg05605 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05605
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF3245)
Genome locationCarg_Chr17:2640922..2643744
RNA-Seq ExpressionCarg05605
SyntenyCarg05605
Gene Ontology termsNA
InterPro domainsIPR021641 - Protein of unknown function DUF3245


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575176.1 U-box domain-containing protein 33, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6493.75Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSNVERPQKSRPPEIIKLNDAAKL       MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKR
        TPVLNNEDDDD+DDND+ESRTAIFDKKRAATRVSMTPLRAKKKR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKR
KAG7013739.1 hypothetical protein SDJN02_23906 [Cucurbita argyrosperma subsp. argyrosperma]5.6e-68100Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKLMTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNE
        MSSNVERPQKSRPPEIIKLNDAAKLMTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNE
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKLMTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNE

Query:  DDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        DDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
Subjt:  DDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
XP_022959368.1 uncharacterized protein LOC111460361 [Cucurbita moschata]4.6e-6292.41Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSNVERPQKSRPPEIIKLNDAAKL       MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        TPVLNNEDDD  DDND+ESRTAIFDKKRAATRV MTPLRAKKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
XP_023006676.1 uncharacterized protein LOC111499331 [Cucurbita maxima]5.6e-6089.66Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSNVERPQKSRPPEIIKLNDAAKL       MTKTEWKE ANDNESTMFEPG RPPRLGLGAKITHNIRNGPSNDP+DRKLYAKLDAVKKQAARKVSED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        TPVL+NE+DDD DD+D+ESRTAIFDKKRAATRVSMTPLRAKKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
XP_023549284.1 uncharacterized protein LOC111807690 [Cucurbita pepo subsp. pepo]6.2e-5988.97Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSNVER QKSRPPEIIKLNDAAKL       MTKTEWKE ANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDP+DRKLYAKLDAVKKQAARKVSED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        TPVLNNEDDDD DDND+ESRTAIFDKKR  TRVSM PL AKKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
TrEMBL top hitse value%identityAlignment
A0A5D3BV19 Putative RNA binding protein9.3e-4572.73Show/hide
Query:  SNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTP
        SN+ERPQKSRPPEIIKLNDAAKL       MT +EWKE   DNEST  EP  RPPRLGLGAK+T + RNGPSNDP+DRKLYAKLDA KKQAARK+SE+TP
Subjt:  SNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTP

Query:  VLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        VL+N+ DDD DD +EESRTAIF+KKRAA  V+M P + KKKRR
Subjt:  VLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
A0A6J1H4P0 uncharacterized protein LOC1114603612.2e-6292.41Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSNVERPQKSRPPEIIKLNDAAKL       MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        TPVLNNEDDD  DDND+ESRTAIFDKKRAATRV MTPLRAKKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
A0A6J1HHS0 uncharacterized protein LOC1114641891.6e-4977.24Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSN+ERPQKSRPPEIIKLNDAAKL       MT  EWKE ANDN+ST+ EP NRPPRLGLGAKI+   RNGPSNDP+DRKLYAKLDA KKQAARK+ ED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        TPV+NNEDDDDNDD +EES TA+FDKKRA TRV+M PL  KKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
A0A6J1KE33 uncharacterized protein LOC1114948433.1e-4875.86Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSN+ERPQKS+PPEIIKLNDAAKL       MT  EWKE ANDN+ST+ EP NRPPRLGLGAKI+   RNGPSNDP+DRKLYAKLDA KKQAARK+ ED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        T VLNNEDDDDNDD +EES+TA+FDKKRA TRV+M P   KKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
A0A6J1KYE5 uncharacterized protein LOC1114993312.7e-6089.66Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED
        MSSNVERPQKSRPPEIIKLNDAAKL       MTKTEWKE ANDNESTMFEPG RPPRLGLGAKITHNIRNGPSNDP+DRKLYAKLDAVKKQAARKVSED
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKL-------MTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSED

Query:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
        TPVL+NE+DDD DD+D+ESRTAIFDKKRAATRVSMTPLRAKKKRR
Subjt:  TPVLNNEDDDDNDDNDEESRTAIFDKKRAATRVSMTPLRAKKKRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G61370.1 Protein of unknown function (DUF3245)2.7e-1238.02Show/hide
Query:  ERPQKSRPPEIIKLNDAAKLMTK--TEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNEDDD
        E  +K   P+I K + A KL  K       P  D+     +   RP RLGLGA+++   +  PS+DP+D+KL AK  AVK++ AR V+E      N  DD
Subjt:  ERPQKSRPPEIIKLNDAAKLMTK--TEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNEDDD

Query:  DNDDNDEESRTAIFDKKRAAT
          DD++ ES++  F KK+  T
Subjt:  DNDDNDEESRTAIFDKKRAAT
AT4G07940.1 Protein of unknown function (DUF3245)1.5e-0730.65Show/hide
Query:  MSSNVERPQKSRPPEIIKLNDAAKLMTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNE
        ++   E  +K  P +I+K + A KL  K                       LGLGA+++   +  PS+DP+D+KL AK  A K++ AR V+E      N 
Subjt:  MSSNVERPQKSRPPEIIKLNDAAKLMTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNE

Query:  DDDDNDDNDEESRTAIFDKKRAAT
         DD+ D ++ ES++  F  K+  T
Subjt:  DDDDNDDNDEESRTAIFDKKRAAT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCAACGTGGAGAGGCCGCAGAAATCTAGACCTCCCGAAATTATTAAGTTGAATGATGCAGCGAAATTGATGACTAAAACCGAGTGGAAAGAACCTGCGAATGA
TAATGAATCAACCATGTTCGAACCCGGGAATCGACCTCCTAGACTTGGACTTGGAGCCAAAATAACACACAATATTAGAAATGGACCGTCTAATGACCCAATTGATAGAA
AACTATATGCCAAGTTGGATGCTGTGAAAAAGCAAGCTGCTAGAAAGGTGTCGGAGGATACTCCGGTACTTAACAATGAAGACGACGACGACAACGACGACAACGACGAA
GAGAGTAGAACTGCCATTTTCGATAAGAAGCGAGCGGCAACTCGAGTATCTATGACTCCTTTACGGGCGAAGAAAAAACGAAGGTAA
mRNA sequenceShow/hide mRNA sequence
TTCAGTTTATAATTCGGCTAATTTAGTTCTGAAAACTCGTATTTCTGTTTATGAATTTCGGATCAGTAAGAATTCTAGCGCCCTAAAAATTCGTAACTGGCCCTTACTTG
AGTTATCGTCGTTGTTTGTTTGATTGCTCTATGATTCGTAAATGTGGATGTGATAAAATAGCTTTTATTTAGGGTTGACATGCTTTTGTCGAAGTGTGTATTTTGGATTC
TTGATATCGAGATTAGAAAAGGTGGGGGCGTTTCATGAAGTGACGGTCGTTCAGTCTAACAATCTGCAGAAATCGTTACTATTTCATCGTGGTTCGTCGCTCGAGTGTTT
GAAGTATTGCAGTCTTGATTTTGCTGTAGCAAACCCAATGAGCAGCAACGTGGAGAGGCCGCAGAAATCTAGACCTCCCGAAATTATTAAGTTGAATGATGCAGCGAAAT
TGATGACTAAAACCGAGTGGAAAGAACCTGCGAATGATAATGAATCAACCATGTTCGAACCCGGGAATCGACCTCCTAGACTTGGACTTGGAGCCAAAATAACACACAAT
ATTAGAAATGGACCGTCTAATGACCCAATTGATAGAAAACTATATGCCAAGTTGGATGCTGTGAAAAAGCAAGCTGCTAGAAAGGTGTCGGAGGATACTCCGGTACTTAA
CAATGAAGACGACGACGACAACGACGACAACGACGAAGAGAGTAGAACTGCCATTTTCGATAAGAAGCGAGCGGCAACTCGAGTATCTATGACTCCTTTACGGGCGAAGA
AAAAACGAAGGTAACTACTTTTGTAGGTAGAGAATATTGTCTAACTAAAGAAATGAACATCTTTACTAGGGTCTCAATCAAGAGGTTACTAATTTTTGTAAGATTCAACC
TTGAATGAAACTTTTGTTGTGATAAATCTTTTTAGTTATGGATATCTTTTTCTTTTTCCTCTTCAAATTTCAAATGATAACGTTGCAGATTGACGTTGATATCGAGGGTA
TAATTTTATTTTGTTCGTATATACGTATGTATGATTGAATCTATTAGTCTAATTGATGTGTCAACAATTTTTTGACTTTGATCGTTATAGAGTTTGAACTCGTCCAAAGA
CTTTTTTTT
Protein sequenceShow/hide protein sequence
MSSNVERPQKSRPPEIIKLNDAAKLMTKTEWKEPANDNESTMFEPGNRPPRLGLGAKITHNIRNGPSNDPIDRKLYAKLDAVKKQAARKVSEDTPVLNNEDDDDNDDNDE
ESRTAIFDKKRAATRVSMTPLRAKKKRR