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Carg05624 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05624
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAUGMIN subunit 4
Genome locationCarg_Chr16:3425355..3427527
RNA-Seq ExpressionCarg05624
SyntenyCarg05624
Gene Ontology termsGO:0051225 - spindle assembly (biological process)
GO:0005876 - spindle microtubule (cellular component)
GO:0070652 - HAUS complex (cellular component)
GO:0051011 - microtubule minus-end binding (molecular function)
InterPro domainsIPR029327 - HAUS augmin-like complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015194.1 AUGMIN subunit 4 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-45100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
XP_022139359.1 AUGMIN subunit 4 [Momordica charantia]1.2e-45100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
XP_022981474.1 AUGMIN subunit 4 [Cucurbita maxima]1.2e-45100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
XP_038900104.1 AUGMIN subunit 4 isoform X1 [Benincasa hispida]1.2e-45100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
XP_038900105.1 AUGMIN subunit 4 isoform X2 [Benincasa hispida]1.2e-45100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
TrEMBL top hitse value%identityAlignment
A0A0A0K3S8 Uncharacterized protein1.3e-4598.97Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKL+NMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
A0A5A7SKF9 AUGMIN subunit 42.3e-4598.97Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFD IARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
A0A6J1CCQ9 AUGMIN subunit 45.9e-46100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
A0A6J1FPS4 AUGMIN subunit 45.9e-46100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
A0A6J1J1Y9 AUGMIN subunit 45.9e-46100Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
        MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST
SwissProt top hitse value%identityAlignment
Q8GYM3 AUGMIN subunit 49.8e-3888.76Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLK
        MNAKL VLE+VLLLETYT +SI ALH IR YLVEATEEAS +YNKAVTRLREYQGVDPHFDTIARQYHDIV KLENMQWTIHQVEMDLK
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLK
Arabidopsis top hitse value%identityAlignment
AT1G50710.1 unknown protein6.9e-3988.76Show/hide
Query:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLK
        MNAKL VLE+VLLLETYT +SI ALH IR YLVEATEEAS +YNKAVTRLREYQGVDPHFDTIARQYHDIV KLENMQWTIHQVEMDLK
Subjt:  MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCGAAACTGAGTGTTTTAGAGCACGTTCTCCTGCTAGAGACTTACACACAGGAATCTATACCAGCCCTTCATAAAATAAGAAAGTATCTTGTTGAAGCAACGGA
GGAAGCTTCTATTTCTTATAATAAAGCAGTCACTCGACTCCGTGAGTATCAAGGTGTAGACCCACATTTCGACACAATTGCGAGGCAGTACCATGATATTGTAATGAAAC
TGGAGAATATGCAATGGACAATTCACCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAGTCAAGTACATGA
mRNA sequenceShow/hide mRNA sequence
TATGTAGGACGATCTCCAGAAAACTTGGCTGTGCAAAAGGTGTGAGACGATGAATGCGAAACTGAGTGTTTTAGAGCACGTTCTCCTGCTAGAGACTTACACACAGGAAT
CTATACCAGCCCTTCATAAAATAAGAAAGTATCTTGTTGAAGCAACGGAGGAAGCTTCTATTTCTTATAATAAAGCAGTCACTCGACTCCGTGAGTATCAAGGTGTAGAC
CCACATTTCGACACAATTGCGAGGCAGTACCATGATATTGTAATGAAACTGGAGAATATGCAATGGACAATTCACCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCA
GTCAAGTACATGAAATATTTACCATAGAATTTGATTCATTTGTCTGTATTGCTTCGTTTATTGTGTTATGATCTGTTTGAAGTTAATATATTTTGTTTTTTTTTTTCATC
AGCAACCTGTTCATAATGTATGATTTGTAAATGGGGTGATGGAGAATGGTCTGATTTTGCACCCACTTTTGTCTTCTTAAATGATTAGTTTCAATTCATCTC
Protein sequenceShow/hide protein sequence
MNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSST