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Carg05628 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05628
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH-ubiquinone oxidoreductase chain
Genome locationCarg_Chr16:3445114..3445398
RNA-Seq ExpressionCarg05628
SyntenyCarg05628
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607802.1 hypothetical protein SDJN03_01144, partial [Cucurbita argyrosperma subsp. sororia]3.2e-43100Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAGESRHRSWRPVLQSIREVD
        MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAGESRHRSWRPVLQSIREVD
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAGESRHRSWRPVLQSIREVD

XP_022139678.1 uncharacterized protein LOC111010526 [Momordica charantia]1.6e-2672.45Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQSIREVD
        MGNCLRRDGAA RWAGEEW FLA   E  G     TAA+TEVKIKITK+QLEELLGK DV+ +SVQQVLAQLI+ G    ESRHR WRPVLQSI E+D
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQSIREVD

XP_022936225.1 uncharacterized protein LOC111442898 [Cucurbita moschata]4.5e-2972.64Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGK--------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQ
        MGNCLRRDGAAA+WAGEEWDFLAA  ED G+        ++ S+ A+TEVKIKITKRQLEELLGKVD++EMSVQQVLAQLI  G    ESRHR WRPVLQ
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGK--------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQ

Query:  SIREVD
        SI EVD
Subjt:  SIREVD

XP_022975730.1 uncharacterized protein LOC111475920 [Cucurbita maxima]5.0e-2870.48Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDG-------GKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQS
        MGNCLRRDGAAA+WAGEEWD LAA+ +DG        +++ S+  +TEVKIKITKRQLEELLGKVD++EMSVQQVLAQLI  G    ESRHR WRPVLQS
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDG-------GKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQS

Query:  IREVD
        I EVD
Subjt:  IREVD

XP_023536165.1 uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo]5.0e-2870.75Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGK--------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQ
        MGNC+RRDGAAA+WAGEEWDFLAA  ED G+        ++ S+ A+TEVKIKITKRQLEELLGKVD++EMSVQQVLAQLI       ESRHR WRPVLQ
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGK--------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQ

Query:  SIREVD
        SI EVD
Subjt:  SIREVD

TrEMBL top hitse value%identityAlignment
A0A0D2NK27 Uncharacterized protein3.6e-1650.46Show/hide
Query:  MGNCLR--RDGAAARWAGEEWDFLAADVEDGGKRQG------------STAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG---ESRHRSW
        MGNCLR  +  ++ RWAG+EW   A+   DG + +G            S +A  EVK+KI+K+QLEELLG+VD +E+SVQQVL QLI+ G   E+  RSW
Subjt:  MGNCLR--RDGAAARWAGEEWDFLAADVEDGGKRQG------------STAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG---ESRHRSW

Query:  RPVLQSIRE
        RP LQSI E
Subjt:  RPVLQSIRE

A0A5D2DN47 Uncharacterized protein1.2e-1651.38Show/hide
Query:  MGNCLR--RDGAAARWAGEEWDFLAADVEDGGKRQG------------STAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG---ESRHRSW
        MGNCLR  +  ++ RWAG+EW   A+   DG + +G            S +A  EVK+KI+K+QLEELLG+VD +E+SVQQVL QLI+AG   E+  RSW
Subjt:  MGNCLR--RDGAAARWAGEEWDFLAADVEDGGKRQG------------STAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG---ESRHRSW

Query:  RPVLQSIRE
        RP LQSI E
Subjt:  RPVLQSIRE

A0A6J1CG88 uncharacterized protein LOC1110105267.8e-2772.45Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQSIREVD
        MGNCLRRDGAA RWAGEEW FLA   E  G     TAA+TEVKIKITK+QLEELLGK DV+ +SVQQVLAQLI+ G    ESRHR WRPVLQSI E+D
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQSIREVD

A0A6J1FD17 uncharacterized protein LOC1114428982.2e-2972.64Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGK--------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQ
        MGNCLRRDGAAA+WAGEEWDFLAA  ED G+        ++ S+ A+TEVKIKITKRQLEELLGKVD++EMSVQQVLAQLI  G    ESRHR WRPVLQ
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDGGK--------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQ

Query:  SIREVD
        SI EVD
Subjt:  SIREVD

A0A6J1IHJ3 uncharacterized protein LOC1114759202.4e-2870.48Show/hide
Query:  MGNCLRRDGAAARWAGEEWDFLAADVEDG-------GKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQS
        MGNCLRRDGAAA+WAGEEWD LAA+ +DG        +++ S+  +TEVKIKITKRQLEELLGKVD++EMSVQQVLAQLI  G    ESRHR WRPVLQS
Subjt:  MGNCLRRDGAAARWAGEEWDFLAADVEDG-------GKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG----ESRHRSWRPVLQS

Query:  IREVD
        I EVD
Subjt:  IREVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.1.6e-1139.66Show/hide
Query:  MGNCLRRDGAAARWAGEEWD-FLAADVED---------GGK------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQ------VLAQLISAGES
        MGNCLR + +   WAGE+WD F+  D ED          GK         S+  S E+KI++TK+QL +LL KV+V +++ QQ      +L        +
Subjt:  MGNCLRRDGAAARWAGEEWD-FLAADVED---------GGK------RQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQ------VLAQLISAGES

Query:  RHRSWRPVLQSIREVD
        + R WRPVLQSI EV+
Subjt:  RHRSWRPVLQSIREVD

AT4G21920.1 unknown protein5.2e-0727.91Show/hide
Query:  MGNCL-RRDGAAARWAGEE------------WDFLAADVEDGGKRQGSTAAST-----------EVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG
        MGNC+   +     W+G++               +  D +DG K  G T+  T           E+KI+ITK++LE+L+  + ++ ++ +++L++LI  G
Subjt:  MGNCL-RRDGAAARWAGEE------------WDFLAADVEDGGKRQGSTAAST-----------EVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAG

Query:  -----------ESRHRSWRPVLQSIREVD
                    + H+ W+PVLQSI E+D
Subjt:  -----------ESRHRSWRPVLQSIREVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACTGTCTGCGGCGGGACGGCGCGGCGGCGCGTTGGGCAGGCGAGGAGTGGGACTTTCTCGCGGCGGATGTGGAGGACGGGGGGAAAAGACAGGGATCCACGGC
GGCGTCCACGGAGGTGAAAATTAAGATCACGAAGAGGCAGTTGGAGGAGCTGTTGGGGAAGGTGGATGTTGAGGAGATGTCCGTACAGCAGGTTTTGGCTCAATTGATCA
GTGCCGGCGAGTCTCGCCACCGTTCGTGGCGCCCGGTGTTGCAGAGCATACGGGAAGTTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACTGTCTGCGGCGGGACGGCGCGGCGGCGCGTTGGGCAGGCGAGGAGTGGGACTTTCTCGCGGCGGATGTGGAGGACGGGGGGAAAAGACAGGGATCCACGGC
GGCGTCCACGGAGGTGAAAATTAAGATCACGAAGAGGCAGTTGGAGGAGCTGTTGGGGAAGGTGGATGTTGAGGAGATGTCCGTACAGCAGGTTTTGGCTCAATTGATCA
GTGCCGGCGAGTCTCGCCACCGTTCGTGGCGCCCGGTGTTGCAGAGCATACGGGAAGTTGACTGA
Protein sequenceShow/hide protein sequence
MGNCLRRDGAAARWAGEEWDFLAADVEDGGKRQGSTAASTEVKIKITKRQLEELLGKVDVEEMSVQQVLAQLISAGESRHRSWRPVLQSIREVD