; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05642 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05642
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLysine-specific demethylase
Genome locationCarg_Chr16:3529409..3530153
RNA-Seq ExpressionCarg05642
SyntenyCarg05642
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607814.1 Vascular-related unknown protein 1, partial [Cucurbita argyrosperma subsp. sororia]4.1e-9299.43Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
        MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKD INLFKRRKMIKELL
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL

Query:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
Subjt:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

KAG7015212.1 hypothetical protein SDJN02_22845, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-93100Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
        MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL

Query:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
Subjt:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

XP_022941072.1 vascular-related unknown protein 4-like [Cucurbita moschata]4.5e-9198.29Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
        MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL

Query:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        VEDEALEDTASSPVNSPKVSDATFFSKN  HNEN+IKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
Subjt:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

XP_022981625.1 vascular-related unknown protein 4-like [Cucurbita maxima]1.2e-8391.01Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTN---HPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIK
        MAKENSTSNSVCHGG+QSPEESGWTIYFQDFLNTN   HPAHYPASSSSH SPDQSYSVADAASSIADHKLPGD++RA MDPNLSCKDHINLFKRRKMIK
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTN---HPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIK

Query:  ELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        ELLVEDEALEDTASSPVNSPKVSD+TFFSK+ RH+EN+IKVNERREMGLVGI +EYKELKKRGLCLVPLCMV+NYLAQ
Subjt:  ELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

XP_023525426.1 vascular-related unknown protein 4-like [Cucurbita pepo subsp. pepo]4.3e-8996Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
        MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHP HYPASSSSHPSPDQSYSVADAASSIA+HKLP DDNRAAMDPNLSCKDHINLFKRRKMIKELL
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL

Query:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        VEDEALEDTASSPVNSPKVSD  FFSKNPR+NENRIKVNERREMGLVGIGNEYKELK+RGLCLVPLCMVMNYLAQ
Subjt:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

TrEMBL top hitse value%identityAlignment
A0A6J1FG95 Uncharacterized protein5.5e-5868.33Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASS-SSHP-SPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKE
        MAKE+S   SVCHGGDQS EESGWTIYF+DFLN +HP + P +S SS P SPDQSY +ADAASS+ DHKL  + + AAMDP  SCKDHIN FK+RKMI E
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASS-SSHP-SPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKE

Query:  LLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        + V+DEALEDTASSPVNSPKV D+ +FSKNPRH    I  +V+ERRE+G L+GIG+EY ELKKRGLCLVP  M++NY+ Q
Subjt:  LLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

A0A6J1FLD8 Uncharacterized protein2.2e-9198.29Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
        MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL

Query:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        VEDEALEDTASSPVNSPKVSDATFFSKN  HNEN+IKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
Subjt:  VEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

A0A6J1IG62 Uncharacterized protein1.3e-5164.25Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSH--PSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKE
        MAKE+S   S+ HGGDQS EESGWTIYF+DFLN +HP + P +S S   PSPDQSY VADAASS+ DHKL G+ + AAM P  SCKDHIN FK+RKMI E
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSH--PSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKE

Query:  LLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRI--KVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        LLV+DEALEDTASSPVNSPKV D+ +FSKNPRH    I  +V+ERR++          ELKKRGLCLVP  M++NY+ Q
Subjt:  LLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRI--KVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

A0A6J1IHA8 Uncharacterized protein1.6e-5767.78Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSH--PSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKE
        MAKE+S   S+ HGGDQS EESGWTIYF+DFLN +HP + P +S S   PSPDQSY VADAASS+ DHKL G+ + AAM P  SCKDHIN FK+RKMI E
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSH--PSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKE

Query:  LLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        LLV+DEALEDTASSPVNSPKV D+ +FSKNPRH    I  +V+ERR++G L+GIG+EY ELKKRGLCLVP  M++NY+ Q
Subjt:  LLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

A0A6J1J018 Uncharacterized protein5.8e-8491.01Show/hide
Query:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTN---HPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIK
        MAKENSTSNSVCHGG+QSPEESGWTIYFQDFLNTN   HPAHYPASSSSH SPDQSYSVADAASSIADHKLPGD++RA MDPNLSCKDHINLFKRRKMIK
Subjt:  MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTN---HPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIK

Query:  ELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
        ELLVEDEALEDTASSPVNSPKVSD+TFFSK+ RH+EN+IKVNERREMGLVGI +EYKELKKRGLCLVPLCMV+NYLAQ
Subjt:  ELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

SwissProt top hitse value%identityAlignment
Q5BPG5 Vascular-related unknown protein 41.5e-1239.75Show/hide
Query:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPD-QSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKEL-LVEDEALEDTASSP
        DQ+PEES WT+YF+DF        + ASSS     D  S SV+DAAS +A  K            N+S ++  NL  +R   +E+       LEDTASSP
Subjt:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPD-QSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKEL-LVEDEALEDTASSP

Query:  VNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYL
          SP V S       N RH    +  +E+R   +   G    +LKK+GLCLVPL MV N+L
Subjt:  VNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYL

Q9C6I7 Vascular-related unknown protein 24.2e-0729.48Show/hide
Query:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL----VEDEALEDTAS
        ++  EES W +YF+D  + +          +H   + S  ++DAAS +   K+     R A + N + K    + + ++  +E L     E+E  EDTAS
Subjt:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL----VEDEALEDTAS

Query:  SPVNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYK---------ELKKRGLCLVPLCMVMNYLA
        SP N  K+ S     + N R+ +    V       +   G++ K         ELKKRGLC+VPL M+ N++A
Subjt:  SPVNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYK---------ELKKRGLCLVPLCMVMNYLA

Q9LSZ3 Vascular-related unknown protein 17.0e-1029.95Show/hide
Query:  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASS
        HGGD   EESGWT Y  DF N     H+  +     S   SYS+   ++S+         +  +   N   K      + +K     + ED++LEDTASS
Subjt:  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASS

Query:  PVNSPKVSDATFFSKNPRH-----------------NENRIKVNERREM----------GLVGIGNEYKELKKRGLCLVPLCMVMNY
        PVNSPKVS        PR                   +++I++ E  E           G     N   +L+ RGLC+VP+ M+ N+
Subjt:  PVNSPKVSDATFFSKNPRH-----------------NENRIKVNERREM----------GLVGIGNEYKELKKRGLCLVPLCMVMNY

Arabidopsis top hitse value%identityAlignment
AT1G50930.1 unknown protein3.0e-0829.48Show/hide
Query:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL----VEDEALEDTAS
        ++  EES W +YF+D  + +          +H   + S  ++DAAS +   K+     R A + N + K    + + ++  +E L     E+E  EDTAS
Subjt:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELL----VEDEALEDTAS

Query:  SPVNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYK---------ELKKRGLCLVPLCMVMNYLA
        SP N  K+ S     + N R+ +    V       +   G++ K         ELKKRGLC+VPL M+ N++A
Subjt:  SPVNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYK---------ELKKRGLCLVPLCMVMNYLA

AT3G21710.1 unknown protein1.8e-0834.68Show/hide
Query:  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASS
        HGGD   EESGWT Y  DF N     H+  +     S   SYS+   ++S+         +  +   N   K      + +K     + ED++LEDTASS
Subjt:  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASS

Query:  PVNSPKVSDATFFSKNPRHNENRI
        PVNSPKVS        PR  E+ +
Subjt:  PVNSPKVSDATFFSKNPRHNENRI

AT3G21710.2 unknown protein5.0e-1129.95Show/hide
Query:  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASS
        HGGD   EESGWT Y  DF N     H+  +     S   SYS+   ++S+         +  +   N   K      + +K     + ED++LEDTASS
Subjt:  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASS

Query:  PVNSPKVSDATFFSKNPRH-----------------NENRIKVNERREM----------GLVGIGNEYKELKKRGLCLVPLCMVMNY
        PVNSPKVS        PR                   +++I++ E  E           G     N   +L+ RGLC+VP+ M+ N+
Subjt:  PVNSPKVSDATFFSKNPRH-----------------NENRIKVNERREM----------GLVGIGNEYKELKKRGLCLVPLCMVMNY

AT5G54790.1 unknown protein1.1e-1339.75Show/hide
Query:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPD-QSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKEL-LVEDEALEDTASSP
        DQ+PEES WT+YF+DF        + ASSS     D  S SV+DAAS +A  K            N+S ++  NL  +R   +E+       LEDTASSP
Subjt:  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPD-QSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKEL-LVEDEALEDTASSP

Query:  VNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYL
          SP V S       N RH    +  +E+R   +   G    +LKK+GLCLVPL MV N+L
Subjt:  VNSPKV-SDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAGAAAACTCCACCAGTAACTCCGTCTGCCACGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTCCAAGATTTCCTCAACACCAACCACCC
TGCTCACTATCCTGCCTCCTCCTCTTCTCATCCGTCTCCCGATCAAAGCTACTCCGTCGCCGACGCCGCCTCCTCCATCGCCGATCACAAACTACCCGGCGACGACAACC
GAGCTGCCATGGATCCCAATTTGAGCTGCAAAGATCATATCAACCTTTTCAAGAGAAGGAAGATGATCAAAGAGTTGTTGGTTGAAGATGAAGCTTTGGAGGATACAGCT
AGCTCTCCGGTTAACAGTCCAAAGGTTTCTGATGCAACTTTCTTCAGTAAGAACCCGAGACACAACGAGAACCGAATAAAGGTAAATGAGAGAAGAGAAATGGGTTTAGT
TGGAATTGGAAATGAGTACAAAGAGTTGAAGAAAAGAGGGCTTTGCTTGGTACCTTTGTGTATGGTAATGAATTATTTGGCTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAGAAAACTCCACCAGTAACTCCGTCTGCCACGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTCCAAGATTTCCTCAACACCAACCACCC
TGCTCACTATCCTGCCTCCTCCTCTTCTCATCCGTCTCCCGATCAAAGCTACTCCGTCGCCGACGCCGCCTCCTCCATCGCCGATCACAAACTACCCGGCGACGACAACC
GAGCTGCCATGGATCCCAATTTGAGCTGCAAAGATCATATCAACCTTTTCAAGAGAAGGAAGATGATCAAAGAGTTGTTGGTTGAAGATGAAGCTTTGGAGGATACAGCT
AGCTCTCCGGTTAACAGTCCAAAGGTTTCTGATGCAACTTTCTTCAGTAAGAACCCGAGACACAACGAGAACCGAATAAAGGTAAATGAGAGAAGAGAAATGGGTTTAGT
TGGAATTGGAAATGAGTACAAAGAGTTGAAGAAAAGAGGGCTTTGCTTGGTACCTTTGTGTATGGTAATGAATTATTTGGCTCAATAA
Protein sequenceShow/hide protein sequence
MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTA
SSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ