; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05649 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05649
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor ILR3-like
Genome locationCarg_Chr16:3571548..3574625
RNA-Seq ExpressionCarg05649
SyntenyCarg05649
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044818 - Transcription factor ILR3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015219.1 Transcription factor ILR3 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-54100Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDHVLRPPVA
Subjt:  AVDTSQDHVLRPPVA

XP_008454561.1 PREDICTED: transcription factor ILR3-like [Cucumis melo]6.5e-4689.57Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   GFLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDH+LRPPVA
Subjt:  AVDTSQDHVLRPPVA

XP_022940189.1 transcription factor ILR3-like [Cucurbita moschata]1.3e-54100Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDHVLRPPVA
Subjt:  AVDTSQDHVLRPPVA

XP_022981592.1 transcription factor ILR3-like [Cucurbita maxima]1.3e-54100Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDHVLRPPVA
Subjt:  AVDTSQDHVLRPPVA

XP_038900262.1 transcription factor ILR3-like [Benincasa hispida]2.2e-4690.43Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   GFLPPPIPTFAAQ QAP G+KLVPFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDH+LRPPVA
Subjt:  AVDTSQDHVLRPPVA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N8 BHLH domain-containing protein2.4e-4690.43Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   GFLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDHVLRPPVA
Subjt:  AVDTSQDHVLRPPVA

A0A1S3BYW4 transcription factor ILR3-like3.2e-4689.57Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   GFLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDH+LRPPVA
Subjt:  AVDTSQDHVLRPPVA

A0A5D3BHU4 Transcription factor ILR3-like3.2e-4689.57Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   GFLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDH+LRPPVA
Subjt:  AVDTSQDHVLRPPVA

A0A6J1FJB6 transcription factor ILR3-like6.3e-55100Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDHVLRPPVA
Subjt:  AVDTSQDHVLRPPVA

A0A6J1IUE4 transcription factor ILR3-like6.3e-55100Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
        AVDTSQDHVLRPPVA
Subjt:  AVDTSQDHVLRPPVA

SwissProt top hitse value%identityAlignment
Q8L467 Transcription factor bHLH1049.2e-1952.17Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        ++NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +GF+P     F     A     + P  GY P   MW +MP +
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
          DTS+D  LRPP A
Subjt:  AVDTSQDHVLRPPVA

Q9C682 Transcription factor bHLH1154.7e-3167.8Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFM
        MVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P     FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFM
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFM

Query:  PPAAVDTSQDHVLRPPVA
        PPAAVDTSQDHVLRPPVA
Subjt:  PPAAVDTSQDHVLRPPVA

Q9FH37 Transcription factor ILR32.2e-3674.79Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQF
        MV QLR EAQKLK+SNSSLQDKIKELK EKNELRDEKQRLK +KEKLEQQ+K+M+A    F P P  +PT   +AQ QAP GNK+VP I Y P VAMWQF
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQF

Query:  MPPAAVDTSQDHVLRPPVA
        MPPA+VDTSQDHVLRPPVA
Subjt:  MPPAAVDTSQDHVLRPPVA

Q9LTC7 Transcription factor bHLH348.6e-1749.14Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIP-TFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPP
        +VNQLR EA +L+E+N  L ++IK LKA+KNELR+EK  LKA+KEK+EQQ+KSM     GF+P   P  F +   A       P+  Y P++ MW  +PP
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIP-TFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPP

Query:  AAVDTSQDHVLRPPVA
        A  DTS+D    PPVA
Subjt:  AAVDTSQDHVLRPPVA

Arabidopsis top hitse value%identityAlignment
AT1G51070.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.3e-3267.8Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFM
        MVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P     FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFM
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFM

Query:  PPAAVDTSQDHVLRPPVA
        PPAAVDTSQDHVLRPPVA
Subjt:  PPAAVDTSQDHVLRPPVA

AT1G51070.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.3e-3267.8Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFM
        MVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P     FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFM
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFM

Query:  PPAAVDTSQDHVLRPPVA
        PPAAVDTSQDHVLRPPVA
Subjt:  PPAAVDTSQDHVLRPPVA

AT4G14410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.6e-2052.17Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        ++NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +GF+P     F     A     + P  GY P   MW +MP +
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
          DTS+D  LRPP A
Subjt:  AVDTSQDHVLRPPVA

AT4G14410.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.6e-2052.17Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA
        ++NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +GF+P     F     A     + P  GY P   MW +MP +
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPA

Query:  AVDTSQDHVLRPPVA
          DTS+D  LRPP A
Subjt:  AVDTSQDHVLRPPVA

AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.6e-3774.79Show/hide
Query:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQF
        MV QLR EAQKLK+SNSSLQDKIKELK EKNELRDEKQRLK +KEKLEQQ+K+M+A    F P P  +PT   +AQ QAP GNK+VP I Y P VAMWQF
Subjt:  MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQF

Query:  MPPAAVDTSQDHVLRPPVA
        MPPA+VDTSQDHVLRPPVA
Subjt:  MPPAAVDTSQDHVLRPPVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAACTGAAGGCCGAGAAGAATGAGCTTCGTGACGAGAA
GCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTC
AAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTC
CGGCCACCCGTCGCCTAA
mRNA sequenceShow/hide mRNA sequence
AACAATAATACGCCCCCAATCCCCAATCTTCAACGAATTTTATCGTCCCCAAATTTTTCATCTCCTTCAATTGCCCTAACCCTAATTCTGGTCCTCTGATTTTGCTTTCA
ATTATCATTCTGATCGGATTAGTAACGCTTTTTTGTTGTTGTTGTTGTTGTTGTTATTGTTGTTTGAGAAAATGGTATCCCCTGAAAATTCCAATTGGTTGTTTGATTAT
GGTTTGATCGATGACATCCCCGTCTCGGATGCGAATTTCCCAGTCACCAGTTCGAGCTTCTCGTGGGCTGTTCAACCCTTTGATGGCACCCATGATGTCGGGTAATCTTC
AGATCTCTTTCGATTAAGCTCTTAAGCTTGTTTTTGTTTTTTTCGTATCGAAAGCTAAATTAGGTTTTGTTTGCTTCGAATGGTGGTTTGTTTTTTGTGTTTCTTCCCGG
GTTTTCGTGTACTTGCCGAATTATGGGAGGTGGAGTGGCCCTTTAATTGCCGTCCAGATTAATATTGGAGAAGATCTCAACCTGCTTTGGAGCTTTTTTGGATTGAGCTA
GTAATGAGTTCGGACGTCCGAGTTTTTTGACTGGAAAACTCTGAGTGCGGAAATTGATGGGTCATCGGCAGATCTGGATGGTCGTCTAGAATCTGGCTCCAAAAAGAGGG
TCCGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAAAAATTGCGGAGAGATAGGCTCAACGAGAAGTTTCTGACACTGGGCTCCATTTTGGAACCTGGA
AGGACACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGA
TAAGATTAAAGAACTGAAGGCCGAGAAGAATGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACC
CTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGG
CAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAACTCGGTGACCAGCTGAGGTTTCCTGTAAAATTCCACTGGCAGCA
TCTGGTTGCTTGGGAATTTATCCTTAACTTCAATATTTATTCTGTCATTGTGGAGCAATATATATTAGTATTGGTAGTTTGTAGGGTTGTCAATTGTTTTTGGGACTGAC
TATCATATGTGTCATTGGATACTTGAAAGAAGAACAAGTACTATCTTGTAATTGTAAATGTGATTTGAGTGATTTGCTAAATGACTCTCTCCATTCCATGCCCTTTCCGC
GTTCTCTGGTGGTGAATAGTGAAGTTGGGGAAGCCATTGCCACTCATCTTTAGCCCTTCAATTATACGTTGCACACTACGTATAAT
Protein sequenceShow/hide protein sequence
MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVL
RPPVA