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Carg05675 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05675
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein light chain
Genome locationCarg_Chr16:3706230..3707421
RNA-Seq ExpressionCarg05675
SyntenyCarg05675
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]5.6e-08100Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
KAG7015244.1 hypothetical protein SDJN02_22878, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-27100Show/hide
Query:  MAANNLLLRLSSKPGIRFSASSNSRQLRRVGGMLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVNGSD
        MAANNLLLRLSSKPGIRFSASSNSRQLRRVGGMLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVNGSD
Subjt:  MAANNLLLRLSSKPGIRFSASSNSRQLRRVGGMLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVNGSD
XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]5.6e-08100Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
XP_022981659.1 dynein light chain 2, cytoplasmic-like [Cucurbita maxima]5.6e-08100Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
XP_023525676.1 dynein light chain 2, cytoplasmic-like [Cucurbita pepo subsp. pepo]1.6e-0797.06Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKAIVGETDMLQAMQQDAL+LAAKALDRFDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
TrEMBL top hitse value%identityAlignment
A0A022PUF4 Dynein light chain3.0e-0786.49Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVNGS
        MLEGKA+VGETDML+AMQQDALDLAAKALD FDV  S
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVNGS
A0A1R3KBZ6 Dynein light chain2.3e-0788.57Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVN
        MLEGKA++GETDMLQAMQ+DALDLAAKALD FDVN
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVN
A0A6J1FDE1 Dynein light chain2.3e-0791.18Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKA++GETDMLQAMQQDALDLAAKALD FDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
A0A6J1FSQ1 Dynein light chain2.7e-08100Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
A0A6J1J2G7 Dynein light chain2.7e-08100Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27360.1 Dynein light chain type 1 family protein3.0e-0770.59Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV
        MLEGKA++G+TDM Q M++DAL LA+KALD FDV
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGAACAATCTGTTGCTGCGACTCTCCAGCAAACCAGGAATTCGTTTCTCCGCCAGCAGCAACAGCCGCCAGCTCCGCCGCGTGGGAGGCATGTTGGAAGGCAA
AGCAATCGTGGGCGAGACGGACATGCTGCAGGCGATGCAGCAGGACGCGTTGGACCTGGCGGCTAAGGCACTGGACAGGTTTGATGTGAACGGAAGCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGAACAATCTGTTGCTGCGACTCTCCAGCAAACCAGGAATTCGTTTCTCCGCCAGCAGCAACAGCCGCCAGCTCCGCCGCGTGGGAGGCATGTTGGAAGGCAA
AGCAATCGTGGGCGAGACGGACATGCTGCAGGCGATGCAGCAGGACGCGTTGGACCTGGCGGCTAAGGCACTGGACAGGTTTGATGTGAACGGAAGCGACTGA
Protein sequenceShow/hide protein sequence
MAANNLLLRLSSKPGIRFSASSNSRQLRRVGGMLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVNGSD