CuGenDBv2

Gene ID	Carg05684
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HMA domain-containing protein
Genome location	Carg_Chr16:3818972..3822020
RNA-Seq Expression	Carg05684
Synteny	Carg05684
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006121 - Heavy metal-associated domain, HMA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588977.1 hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-85

99.44

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSISRPATANPTPFPIFRSSISLH+SSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

KAG7015253.1 hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-85

100

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

XP_022928515.1 uncharacterized protein LOC111435303 [Cucurbita moschata]

1.3e-85

99.44

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

XP_022989147.1 uncharacterized protein LOC111486304 [Cucurbita maxima]

8.8e-82

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSISRPATANPTPFP+FRSSISLHTS+NFA +AA+FRHSAVYGHRQ RGL+KR AVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

XP_023529800.1 uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo]

6.1e-83

96.67

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSISRPATANPTPFP+FRSSISLHTS+NFA SAASFRHSAVYGHRQ RGLK RRAVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D9Q3 uncharacterized protein LOC111018338

7.1e-53

73.37

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-----ETPAVTVSVSPSDML
        MASISTF   HSISRP  ANP    I   SISL T SN + +AASFR+S V G R+ R LK+  AVE +A++PEQEVEGE     E PAVTV VSPSD+L
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-----ETPAVTVSVSPSDML

Query:  TMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVF
        TMFFQAEGTLNE+AIPSVTEALEQTEG T LKV+VVEGIASVELTKQ TIQSTGVASSLIE IQ AGFKLQTLNLSF+D EEVF
Subjt:  TMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVF

A0A6J1ERV9 uncharacterized protein LOC111435303

6.4e-86

99.44

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

A0A6J1F3X5 uncharacterized protein LOC111441946

7.4e-58

74.33

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD
        MASIS FP  HS+SRPA ANP+  PI R S +L +SS+F VSAASF HSAV G  + RGLK+ R VE +AS+PEQ VEGE       E PAVTV VS SD
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD

Query:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        +LTMFFQAEGTLNESA+PSVTEALEQT+G T LKVQ+VEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

A0A6J1J0J2 uncharacterized protein LOC111482359

6.2e-57

73.26

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD
        MASIS FP  HS+SRPA ANP+  PIFR S +L +SS+F VSAA+FRHSA  G  + RGLK+ R VE +AS+PEQ  EGE       E PAVTV VS SD
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD

Query:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        +LTMFFQAEGTLNESA+PSVTEALEQT+G T LKVQ+VEGIASVELTKQ TIQSTGVASSLIE IQ AGFKLQTLNLSFED EEVFV
Subjt:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

A0A6J1JF03 uncharacterized protein LOC111486304

4.3e-82

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSISRPATANPTPFP+FRSSISLHTS+NFA +AA+FRHSAVYGHRQ RGL+KR AVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14910.1 Heavy metal transport/detoxification superfamily protein

6.2e-33

52.17

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Query:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSA-ASFRHSAVYGH-RQSR-GLKKRRAV-EGEASVPEQEVEGEETPAVTVSVSPSDMLT
        MASI+    FHS  R  + N +   +    + L  + NF   A  + R+ +  G  +Q+R GL+K  ++ EG   V   E + +ET  V+V VSPSDMLT
Subjt:  MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSA-ASFRHSAVYGH-RQSR-GLKKRRAV-EGEASVPEQEVEGEETPAVTVSVSPSDMLT

Query:  MFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        MFFQA+GTLNE+AIP+VT AL+  +G + LKVQV EG+A VEL KQ T+Q+TGVAS+L+ETIQ AGFKLQTLNLSFED++EV V
Subjt:  MFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCATTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACACCTCCTC
CAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGTCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAG
AGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGACTCTAAATGAATCAGCTATT
CCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTCACAAAGCAAATAACAATACAATC
GACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAACGAAGAAGTTTTTGTTTAG

mRNA sequence

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AAACACTTCACCCCCACGTAGAAACCTTCAAGAACATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCATTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCC
ATTTTCAGATCTTCAATCTCTCTTCACACCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGTCACAGGCAGTCACGCGGCCTGAAAAA
ACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCT
TTCAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCA
TCTGTTGAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTT
CGAGGACAACGAAGAAGTTTTTGTTTAGGTACTCGTGATTGTGATTGTTAGAGTTGGAGAGGGAAAGAGAGAAAAAAATGGAGAGAGATAGGGATAATAGGAGGCTATTT
AAGAGCTCCATTGATCATGTCATGGAAGGTTGGACTGTGGGGATTACATTCTTTGAAGTAAAATTTAAATGAGCCATTTGCTTTGAAACCAATAATGAGGTAAGGCCTCA
CATAGTAAAGAATCTTATATGGGACC

Protein sequence

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MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAI
PSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

Carg05684 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome