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Carg05715 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05715
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontrafficking protein particle complex subunit 2-like protein
Genome locationCarg_Chr16:4018247..4021442
RNA-Seq ExpressionCarg05715
SyntenyCarg05715
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR007233 - Trafficking protein particle complex subunit
IPR011012 - Longin-like domain superfamily
IPR044760 - Trafficking protein particle complex subunit 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589019.1 Transcription factor ABORTED MICROSPORES, partial [Cucurbita argyrosperma subsp. sororia]3.7e-75100Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_004144858.1 trafficking protein particle complex subunit 2-like protein [Cucumis sativus]1.4e-7499.3Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+FFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_022136317.1 trafficking protein particle complex subunit 2-like protein [Momordica charantia]2.0e-7396.5Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA+
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_022928280.1 trafficking protein particle complex subunit 2-like protein [Cucurbita moschata]3.7e-75100Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_031127945.1 trafficking protein particle complex subunit 2-like protein [Ipomoea triloba]6.0e-7397.18Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNP+KSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRNFFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA
        RFHAAYVDAVSNPFHVPGKKITS+TFAESVSTIVKSFG SSA
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA

TrEMBL top hitse value%identityAlignment
A0A0A0K4Q0 Uncharacterized protein6.9e-7599.3Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+FFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A1S3BJH9 trafficking protein particle complex subunit 2-like protein6.9e-7599.3Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+FFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A6J1C584 trafficking protein particle complex subunit 2-like protein9.9e-7496.5Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA+
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A6J1ERA2 Trafficking protein particle complex subunit1.8e-75100Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A6J1JPT4 Trafficking protein particle complex subunit1.8e-75100Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
        RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

SwissProt top hitse value%identityAlignment
A6H7F7 Trafficking protein particle complex subunit 2-like protein1.0e-3047.79Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF
        M VCVAV+  +N PLYI+S    ++ LK H++VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ 
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF

Query:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV
        FR+ H +Y D + NPF+ PG +I S+ F   V++++
Subjt:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV

B2RYU6 Trafficking protein particle complex subunit 2-like protein2.0e-3147.79Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF
        M VC+AV+  +N PLYI+S T  ++ LK H++VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ 
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF

Query:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV
        FR+ H +Y D + NPF+ PG +I S+ F   V++++
Subjt:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV

Q54CU7 Trafficking protein particle complex subunit 2-like protein5.7e-3448.92Show/hide
Query:  IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDL-DVRDADVRN
        IVCVA+VG  NNPL+IQ F+ +   ++ LKLH+IVHCSLD+++++  + +K     ++ +LGLLYPTE+YKVYGYLTNTK+KFI+V  D  D++D+D++ 
Subjt:  IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDL-DVRDADVRN

Query:  FFRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKS
        FF+R    +++  SNPF+ P  K+ SK F + V+ +V S
Subjt:  FFRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKS

Q5M8X5 Trafficking protein particle complex subunit 2-like protein1.2e-3148.53Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF
        M VCVAV+  +N PLYI+S T  ++ LK H+ VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ 
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF

Query:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV
        FR+ H +Y D + NPF+ PG  I S+ F  +V++++
Subjt:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV

Q9JME7 Trafficking protein particle complex subunit 2-like protein2.6e-3147.79Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF
        M VC+AV+  +N PLYI+S T  +  LK H++VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ 
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNF

Query:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV
        FR+ H +Y D + NPF+ PG +I S+ F   V++++
Subjt:  FRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIV

Arabidopsis top hitse value%identityAlignment
AT2G20930.1 SNARE-like superfamily protein1.2e-6886.43Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR
        MIVCVAVVGHQNNPLYIQSFT+ADDALKLHHIVHCSLDV++ERVNNP+KSG TLNE FLGLLYPT NYKVYGYLTNTKVKFI+VTTDLDVRD DVR+FFR
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFR

Query:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFS
        +FHAAYVDAVSNPFHVPGKKITS+TFA++VS IV S+G +
Subjt:  RFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTTTGCGTCGCCGTCGTCGGCCACCAGAACAACCCCCTTTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTTCATCACATCGTGCACTGTTCGCT
GGATGTCGTCGATGAGCGAGTGAACAATCCGAGAAAATCTGGACCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTATGGCTACT
TGACTAATACCAAAGTGAAGTTCATTATGGTGACCACAGATCTGGATGTCAGAGATGCCGATGTGAGAAATTTCTTCCGGAGATTCCATGCTGCATACGTGGATGCAGTT
TCAAACCCATTCCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCTGAAAGTGTGAGTACCATAGTCAAGTCGTTTGGGTTCAGTTCAGCTATTTGA
mRNA sequenceShow/hide mRNA sequence
AACCGGAATTTCGCATTTGCCCAAGTTTTGGCTCAATTCAGGAGAAGAAAACCGACCGGTCACCGCCGAAAATGATCGTTTGCGTCGCCGTCGTCGGCCACCAGAACAAC
CCCCTTTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTTCATCACATCGTGCACTGTTCGCTGGATGTCGTCGATGAGCGAGTGAACAATCCGAGAAAATC
TGGACCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTATGGCTACTTGACTAATACCAAAGTGAAGTTCATTATGGTGACCACAG
ATCTGGATGTCAGAGATGCCGATGTGAGAAATTTCTTCCGGAGATTCCATGCTGCATACGTGGATGCAGTTTCAAACCCATTCCATGTACCAGGTAAGAAAATTACTTCC
AAAACTTTTGCTGAAAGTGTGAGTACCATAGTCAAGTCGTTTGGGTTCAGTTCAGCTATTTGAGTGACCAACCAGGAAACCACTGTCTGTAGCCATCGACAGCCATAGTT
CATTACTCATCTTTCTGGTTTTTATTGATTTTATTCGAAAATATTCGACTCGAATTGTACTAAGAAAGATGGAACAAACAGGTGTGGTCTTTTTCTAGCTTTTTCTCAAA
CAATTCAACCTTTTTTTTTTCATTGATATTCACTGGTTCCATTTTATGCTCGTTTCCCATGATTGTTCCAATGACTGAATTCTGGTTTGAGGTGCAATTTTCTCCATATA
AAATGCAAGATTGAAAGGTGAGAATGAAGGGGTCATTGGCTTATCAAAGTTTAGAGTTGGTTGGTCTTGATTTGTATAATTTGTGTTTAGAGGTGCAATTTTCTTCGTAT
ATGTTATGAAAGTTTATCTATTTGTTCGTGTTTTAAACGATTTCTCATTTAAGATCGTATATATTTGGTCTATATACTTTT
Protein sequenceShow/hide protein sequence
MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAV
SNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI