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Carg05717 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05717
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein translocase complex, SecE/Sec61-gamma subunit
Genome locationCarg_Chr16:4026856..4028658
RNA-Seq ExpressionCarg05717
SyntenyCarg05717
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0090351 - seedling development (biological process)
GO:0009528 - plastid inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR038379 - SecE superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589021.1 hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sororia]2.2e-9497.31Show/hide
Query:  VHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQ
        +   GALIVAAVYEKPEIFEWALLNSC+RMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQ
Subjt:  VHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQ

Query:  LRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        LRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  LRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

KAG7015285.1 hypothetical protein SDJN02_22920, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-103100Show/hide
Query:  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH
        PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH
Subjt:  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH

Query:  AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

XP_022928229.1 uncharacterized protein LOC111435124 [Cucurbita moschata]4.9e-10298.97Show/hide
Query:  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH
        PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSC+RMVIASALGANHIGMASLPHSNR FHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH
Subjt:  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH

Query:  AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

XP_022989177.1 uncharacterized protein LOC111486331 [Cucurbita maxima]4.3e-7494.27Show/hide
Query:  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
        MVIASALGANHIGM SLPHSNR F V YNTAR NKAN+FQGLPTRIS RGGHLYADRMGFNHAASGRDN QLRFNDELPPEPFFLGIIKETVWGLRSLFI
Subjt:  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI

Query:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLS+ILTFILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

XP_023529805.1 uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]1.4e-7798.09Show/hide
Query:  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
        MVIASALGANHIGMASLPHSNR FHVRYNTAR NKANIFQGLPTRISRR GHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
Subjt:  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI

Query:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

TrEMBL top hitse value%identityAlignment
A0A0A0K1C8 Uncharacterized protein1.2e-5374.68Show/hide
Query:  MVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL
        MVI S LG  HIG+  LP S   +HV +YNT RLNK+++FQ L TRIS+R G HLYA RMGFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL
Subjt:  MVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL

Query:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT
         IFL EQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSY+LT ILRRT
Subjt:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT

A0A1S3BJG9 uncharacterized protein LOC1034902693.8e-5273.58Show/hide
Query:  MVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL
        MVI S LG +HIG+  LP     +HV RYN  RLNK+++FQ L TRIS+R G HLYA RMGFNHAASG++ QQ  FNDE P EPFFL +IKET WGLRSL
Subjt:  MVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL

Query:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
         IFL EQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSY+LT +LRRTS
Subjt:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

A0A6J1C3M0 uncharacterized protein LOC1110080491.4e-5472.78Show/hide
Query:  MVIASALGANHIGMASLPHSNRTFHVRY-NTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLF
        M IASALGANHIGM   PH  +  H+ + NT R NK+N FQ LP  ISRR GHLYA RM FNHAASGR+N QL FN+E PPEPF L +I+E +WGLRSL 
Subjt:  MVIASALGANHIGMASLPHSNRTFHVRY-NTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLF

Query:  IFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        IFL EQPSQLKYIEWPSFQSTLKTAT  LVLVALLIVALSSVDS LSYILT +LRR++
Subjt:  IFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

A0A6J1EK97 uncharacterized protein LOC1114351242.4e-10298.97Show/hide
Query:  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH
        PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSC+RMVIASALGANHIGMASLPHSNR FHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH
Subjt:  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNH

Query:  AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  AASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

A0A6J1JF36 uncharacterized protein LOC1114863312.1e-7494.27Show/hide
Query:  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
        MVIASALGANHIGM SLPHSNR F V YNTAR NKAN+FQGLPTRIS RGGHLYADRMGFNHAASGRDN QLRFNDELPPEPFFLGIIKETVWGLRSLFI
Subjt:  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI

Query:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLS+ILTFILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38490.1 unknown protein2.9e-2065.33Show/hide
Query:  EPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRR
        EP +L ++++ VW  RSL  F+AEQPSQLKYIEWP+F STLKTAT +L LVA+ IVALSSVD+ L YIL  ILR+
Subjt:  EPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCAACTATACTGCGTGCATTTTCATTGTTCATTCTAAAGGCGCGCTCATCGTAGCTGCAGTCTACGAGAAGCCTGAAATTTTCGAGTGGGCGTTATTAAACTCTTGCAC
TAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGAACATTTCATGTTCGTTACAACACAGCCAGATTAAACAAGG
CCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTG
AGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACT
GAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCA
GCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAA
mRNA sequenceShow/hide mRNA sequence
CCCAACTATACTGCGTGCATTTTCATTGTTCATTCTAAAGGCGCGCTCATCGTAGCTGCAGTCTACGAGAAGCCTGAAATTTTCGAGTGGGCGTTATTAAACTCTTGCAC
TAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGAACATTTCATGTTCGTTACAACACAGCCAGATTAAACAAGG
CCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTG
AGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACT
GAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCA
GCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAATGAATTCTGGTACTTCTCACTTCTTGTTACAAAATATTTTCAGAACTTCAACTTTTCTTTGCTGTTTTTAAA
TCGATGGTTGAGAGTGAGCGTTCTTGGTGTATATTAATGTTGTTGGAGATGTTTACACTAGCGTGTCTATGAAATCATGCCGTAAGGGAAGTATAGAGA
Protein sequenceShow/hide protein sequence
PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQL
RFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS