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Carg05755 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05755
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin-conjugating enzyme family protein
Genome locationCarg_Chr16:4240356..4243237
RNA-Seq ExpressionCarg05755
SyntenyCarg05755
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY86196.1 ubiquitin-conjugating enzyme 16 [Actinidia rufa]4.0e-5387.27Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
        MTS++  +RK LSKIAC RLQKEL+EWQVNPPAGFKH+VTDNLQRW+I+VNGAPGTLY+NETYQLQVDFPEHYPME+PQQRP DNDRYVKNCRNGRSPKE
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE

Query:  TRWWFHDDKV
        TRWWFHDDKV
Subjt:  TRWWFHDDKV

GFZ10361.1 ubiquitin-conjugating enzyme 16 [Actinidia rufa]1.6e-5489.09Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
        MTS++  +RK+LSKIACNRLQKEL+EWQVNPPAGFKH+VTDNLQRW+I+VNGAPGTLYANETYQLQVDFPEHYPME+PQQRP DNDRYVKNCRNGRSPKE
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE

Query:  TRWWFHDDKV
        TRWWFHDDKV
Subjt:  TRWWFHDDKV

KAG7015323.1 putative ubiquitin-conjugating enzyme E2 18 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-59100Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
        MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE

Query:  TRWWFHDDKV
        TRWWFHDDKV
Subjt:  TRWWFHDDKV

XP_022929509.1 probable ubiquitin-conjugating enzyme E2 18 [Cucurbita moschata]3.4e-5268.32Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

XP_022942312.1 probable ubiquitin-conjugating enzyme E2 16 [Cucurbita moschata]7.6e-5267.7Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKH+VTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

TrEMBL top hitse value%identityAlignment
A0A0D9VXH0 UBC core domain-containing protein4.4e-5390Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
        MTSSS  +RKALSKIACNRLQKEL EWQVNPP+GFKH+VTDNLQRWVIEV GA GTLYA ETYQLQVDFPEHYPMEAPQQRP DNDRYV+NCRNGRSPKE
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE

Query:  TRWWFHDDKV
        TRWWFHDDKV
Subjt:  TRWWFHDDKV

A0A6J1ENY4 probable ubiquitin-conjugating enzyme E2 181.7e-5268.32Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

A0A6J1JD15 probable ubiquitin-conjugating enzyme E2 181.7e-5268.32Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

A0A7J0EJ15 Ubiquitin-conjugating enzyme 162.0e-5387.27Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
        MTS++  +RK LSKIAC RLQKEL+EWQVNPPAGFKH+VTDNLQRW+I+VNGAPGTLY+NETYQLQVDFPEHYPME+PQQRP DNDRYVKNCRNGRSPKE
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE

Query:  TRWWFHDDKV
        TRWWFHDDKV
Subjt:  TRWWFHDDKV

A0A7J0GI01 Ubiquitin-conjugating enzyme 167.9e-5589.09Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE
        MTS++  +RK+LSKIACNRLQKEL+EWQVNPPAGFKH+VTDNLQRW+I+VNGAPGTLYANETYQLQVDFPEHYPME+PQQRP DNDRYVKNCRNGRSPKE
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKE

Query:  TRWWFHDDKV
        TRWWFHDDKV
Subjt:  TRWWFHDDKV

SwissProt top hitse value%identityAlignment
O23239 Probable ubiquitin-conjugating enzyme E2 177.9e-4455.28Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKHRV+DNLQRW+IEV+G PGTLYANETYQLQV+FPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      Q+P DND Y+KNC++GRSPKETRW FHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

P42743 Ubiquitin-conjugating enzyme 152.0e-4759.01Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+H+VTDNLQ+W I+V GAPGTLYANETYQLQV+FPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Q55EY8 Probable ubiquitin-conjugating enzyme E2 W1.8e-1130.07Show/hide
Query:  RLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQ--------------------------------------
        RLQKEL++ + NPP        DNL +WVI V+G  G++Y  E ++LQ  F   YP+++P+                                       
Subjt:  RLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQ--------------------------------------

Query:  -------------RPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                     RP D+ +YV    N +SPKE RW FHDD V
Subjt:  -------------RPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Q9FMM0 Probable ubiquitin-conjugating enzyme E2 181.1e-4860.87Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKHRVTDNLQ+WVIEV GAPGTLYANETY LQV+FP+HYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Q9FWT2 Probable ubiquitin-conjugating enzyme E2 161.7e-4658.39Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKH+VTDNLQRW+IEV GAPGTLYAN+TYQLQVDFPEHYPME+PQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Arabidopsis top hitse value%identityAlignment
AT1G45050.1 Ubiquitin-conjugating enzyme family protein1.4e-4859.01Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+H+VTDNLQ+W I+V GAPGTLYANETYQLQV+FPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

AT1G75440.1 ubiquitin-conjugating enzyme 161.2e-4758.39Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKH+VTDNLQRW+IEV GAPGTLYAN+TYQLQVDFPEHYPME+PQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

AT4G36410.1 ubiquitin-conjugating enzyme 175.6e-4555.28Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKHRV+DNLQRW+IEV+G PGTLYANETYQLQV+FPEHYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      Q+P DND Y+KNC++GRSPKETRW FHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

AT5G42990.1 ubiquitin-conjugating enzyme 187.6e-5060.87Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------
        MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKHRVTDNLQ+WVIEV GAPGTLYANETY LQV+FP+HYPMEAPQ                     
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQ---------------------

Query:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
                                      QRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  ------------------------------QRPDDNDRYVKNCRNGRSPKETRWWFHDDKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCTCCTCCGACTCCGCCCGCAAGGCTCTGAGTAAGATTGCCTGCAATCGCCTCCAGAAGGAGCTCGTTGAGTGGCAGGTCAACCCTCCCGCTGGTTTTAAACA
CAGGGTCACCGATAATCTTCAGAGGTGGGTGATTGAAGTCAACGGAGCCCCTGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGATTTCCCCGAACATTATC
CAATGGAAGCCCCACAGCAACGCCCTGACGATAACGATCGTTATGTAAAGAATTGTAGGAACGGAAGGTCTCCAAAGGAGACGAGGTGGTGGTTCCACGACGACAAAGTG
TAA
mRNA sequenceShow/hide mRNA sequence
CATCTTCGTCACATTCACCATAAAAACTCTCCCCTCTTTCTCTGCCATTGCGGAGCCTAACCCAAGCATGACCAGCTCCTCCGACTCCGCCCGCAAGGCTCTGAGTAAGA
TTGCCTGCAATCGCCTCCAGAAGGAGCTCGTTGAGTGGCAGGTCAACCCTCCCGCTGGTTTTAAACACAGGGTCACCGATAATCTTCAGAGGTGGGTGATTGAAGTCAAC
GGAGCCCCTGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGATTTCCCCGAACATTATCCAATGGAAGCCCCACAGCAACGCCCTGACGATAACGATCGTTA
TGTAAAGAATTGTAGGAACGGAAGGTCTCCAAAGGAGACGAGGTGGTGGTTCCACGACGACAAAGTGTAA
Protein sequenceShow/hide protein sequence
MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV