; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05760 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05760
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationCarg_Chr16:4281795..4282663
RNA-Seq ExpressionCarg05760
SyntenyCarg05760
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577238.1 Protein EXPRESSION OF TERPENOIDS 1, partial [Cucurbita argyrosperma subsp. sororia]7.3e-13595.28Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG

Query:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH
        FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC        P  TDQYAYQTAV+IGGHIFKGILYDHGPDQ H
Subjt:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH

Query:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
Subjt:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

KAG7015328.1 Protein SHI RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-142100Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG

Query:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNP
        FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNP
Subjt:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNP

Query:  PISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        PISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
Subjt:  PISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

XP_022929442.1 protein SHI RELATED SEQUENCE 3-like [Cucurbita moschata]1.9e-13093.7Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRS   GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG

Query:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH
        FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC        P  TDQYAYQTAV+IGGHIFKGILYDHGPDQ  
Subjt:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH

Query:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
Subjt:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

XP_022984770.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]1.5e-12489.8Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGD-GGGKVISCQDCGNQAKKDCVHMRCRTCCKSR
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGE F YSGENSPARSSLVMVRSGGD GGGKVISCQDCGNQAKKDCVHMRCRTCCKSR
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGD-GGGKVISCQDCGNQAKKDCVHMRCRTCCKSR

Query:  GFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQH
        GFLCETHVKSTWVPASKRRERLI T GGDSKRPRDTHA SSGFEIGNFPAE+NSTAVFRC        P  TDQYAYQTAV+IGGHIFKGIL+DHGPDQ 
Subjt:  GFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQH

Query:  HHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
          HHHNPPISASPDGGALLITTA+SAA LDPPPSYPAPL+SYI AGTQFFQPPTS
Subjt:  HHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

XP_023553114.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]2.8e-12690.94Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGG+GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG

Query:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH
        FLCETHVKSTWVPASKRRERLIRT GGDSKRPRDTHAASSGFEIGNFP EVNSTAVFRC        P  TDQYAYQTAV+IGGHIFKGILYDHGPDQ  
Subjt:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH

Query:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
             PPISASPDGGALLITTAESAA LDPPPSYPAPL SYIPAGTQFFQPPTS
Subjt:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein3.8e-8163.57Show/hide
Query:  MAGFFPLGGGGGG-----------SSGGEIIHP-TDGLLWYKNYESFET----EQQQ-------QGGEGFVYSGENSPARSSLVMVRS---GGDGGGKVI
        MAGFFPL GGG G           ++GGEIIHP T+GL WYKNYE  ET    EQQQ       QGGEGFVYSG+ SPARSSLVMVRS   GG GGG V 
Subjt:  MAGFFPLGGGGGG-----------SSGGEIIHP-TDGLLWYKNYESFET----EQQQ-------QGGEGFVYSGENSPARSSLVMVRS---GGDGGGKVI

Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDT--HAASSGFEIGNFPAEVNSTAVFRCTN----PPATDQY
        SCQDCGNQAKKDCVHMRCRTCCKSRGF CETHVKSTWVPASKRR+R +R+ G +SKRP+DT  H  SSG ++GNFP EV + AVFRC          DQY
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDT--HAASSGFEIGNFPAEVNSTAVFRCTN----PPATDQY

Query:  AYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        AYQTAV+IGG IFKGILYDHGP+Q       PP S+S            SAA LDP P YP PL++YI AGTQFF PP+S
Subjt:  AYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

A0A6J1EMT4 protein SHI RELATED SEQUENCE 3-like9.0e-13193.7Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRS   GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRG

Query:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH
        FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC        P  TDQYAYQTAV+IGGHIFKGILYDHGPDQ  
Subjt:  FLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHH

Query:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
Subjt:  HHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like3.6e-8767.29Show/hide
Query:  MAGFFPLGGGGGGS--SGGEIIHPTDGLLWYKNYESF----ETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRT
        MAGFFPLGGG   +          TDGL WY+NYES     + + QQQ GEGFVYSG+ SP RSSLVM+RSG +GGG+VISCQDCGNQAKKDC+HMRCRT
Subjt:  MAGFFPLGGGGGGS--SGGEIIHPTDGLLWYKNYESF----ETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRT

Query:  CCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC----TNPPATDQYAYQTAVHIGGHIFKGILYDHGP
        CCKSRGF CETHVKSTWVPASKRRER +R+ G + KRPRD  AASSG E+ NFP EV+STAVFRC    T     DQ+AYQTAV+IGGH FKGILYDHGP
Subjt:  CCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC----TNPPATDQYAYQTAVHIGGHIFKGILYDHGP

Query:  DQHHHHHHNPPISASPDGGALLITTAE--------SAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        +Q       PP SASPDGGALLIT           SAA LDPPP YPAPLN+Y+ AGTQFF PPTS
Subjt:  DQHHHHHHNPPISASPDGGALLITTAE--------SAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like1.6e-8768.56Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESF----ETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCC
        MAGFFPLGGG   +        TDGL WY+NYES     + + QQQ GEGFVYSG+ SP RSSLVM+RSG +GGG+VISCQDCGNQAKKDC+HMRCRTCC
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESF----ETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCC

Query:  KSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC----TNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQ
        KSRGF CETHVKSTWVPASKRRER +R+   + KRPRD  AASSG E+GNFP EV+STAVFRC    T     DQ+AYQTAV+IGGH FKGILYDHGP+Q
Subjt:  KSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC----TNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQ

Query:  HHHHHHNPPISASPDGGALLI----TTAE----SAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
               PP SASPDGGALLI    TT E    SAA LDPPP YPAPLN+Y+ AGTQFF PPTS
Subjt:  HHHHHHNPPISASPDGGALLI----TTAE----SAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

A0A6J1J673 protein SHI RELATED SEQUENCE 1-like7.4e-12589.8Show/hide
Query:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGD-GGGKVISCQDCGNQAKKDCVHMRCRTCCKSR
        MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGE F YSGENSPARSSLVMVRSGGD GGGKVISCQDCGNQAKKDCVHMRCRTCCKSR
Subjt:  MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGD-GGGKVISCQDCGNQAKKDCVHMRCRTCCKSR

Query:  GFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQH
        GFLCETHVKSTWVPASKRRERLI T GGDSKRPRDTHA SSGFEIGNFPAE+NSTAVFRC        P  TDQYAYQTAV+IGGHIFKGIL+DHGPDQ 
Subjt:  GFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAVHIGGHIFKGILYDHGPDQH

Query:  HHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
          HHHNPPISASPDGGALLITTA+SAA LDPPPSYPAPL+SYI AGTQFFQPPTS
Subjt:  HHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 11.6e-4444Show/hide
Query:  VYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA--------------GGDSKRPR
        + +G++  +RS  VM+RSGG G    ISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER  + A                 +KR R
Subjt:  VYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA--------------GGDSKRPR

Query:  DTHAASS-----------GFEIGNFPAEVNSTAVFRCTNPPA----TDQYAYQTAVHIGGHIFKGILYDHGPDQHH--------------------HHHH
        +  +ASS           G E+G FP++V ++AVF+C    +     DQ AYQ AV IGGH+FKGILYD G +  +                    HHHH
Subjt:  DTHAASS-----------GFEIGNFPAEVNSTAVFRCTNPPA----TDQYAYQTAVHIGGHIFKGILYDHGPDQHH--------------------HHHH

Query:  NPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
        N    A+    +    TA   +    P  +PAPL++++ AGTQFF P  S
Subjt:  NPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

Q9FXH7 Protein SHI RELATED SEQUENCE 72.3e-3840.96Show/hide
Query:  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRD--------------
        ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV A+KRRER  + A   +KR RD              
Subjt:  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRD--------------

Query:  -------------------THAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHH------------HHHHN
                            +A+SSG E  + P E++S AVFRC    + D    +YAYQTAV IGGH+FKGILYD GP   H            H HH 
Subjt:  -------------------THAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHH------------HHHHN

Query:  PPISASPDGGALLITTAESA--APLDPPPSYPA---PLNSYIPAGTQFF
          + ++P        TA +     +DP   Y A   P N+++  GT FF
Subjt:  PPISASPDGGALLITTAESA--APLDPPPSYPA---PLNSYIPAGTQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 56.4e-4138.04Show/hide
Query:  MAGFFPLGGGGGGSSGG-------------------------EIIHPTDGL-LWYKNYESFETEQQQQGGE------------GFVYSG-----ENSPAR
        MAGFF LGG    S+                           EI +   G  +W   Y   +  QQQQ  +            G V SG      N+ +R
Subjt:  MAGFFPLGGGGGGSSGG-------------------------EIIHPTDGL-LWYKNYESFETEQQQQGGE------------GFVYSG-----ENSPAR

Query:  SSLVMVRSGGDGGGKVI------SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA----------------------GGDS
        S    V S  + GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRERL + A                      GGD+
Subjt:  SSLVMVRSGGDGGGKVI------SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA----------------------GGDS

Query:  KRPRDTHA---------------ASSGFEIG-NFPAEVNSTAVFRCTNPPATDQ------YAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPD
           +D                  ++SG E+  + P EVNS A+FRC    + ++      YAYQTAV+IGGHIFKGILYD GP+   +HH N   S +  
Subjt:  KRPRDTHA---------------ASSGFEIG-NFPAEVNSTAVFRCTNPPATDQ------YAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPD

Query:  GGALLITTA------ESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
               T        +   LDP   YPA LNS+I AGT FF PP S
Subjt:  GGALLITTA------ESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 16.6e-4639.35Show/hide
Query:  MAGFFPLGGGGGGSSGG--------EIIHP----TDGLLWYKNYE-----------------------------------SFETEQQQQ--------GGE
        MAGFF L GGGGG  GG           +P    ++  LWY+N                                      F+ +Q QQ         G 
Subjt:  MAGFFPLGGGGGGSSGG--------EIIHP----TDGLLWYKNYE-----------------------------------SFETEQQQQ--------GGE

Query:  G--------FVYSGENSPA----RSSLVMVRSGGDGGGK-VISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA-------
        G        F  SGE S A     ++++M+RSGG GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF C THV+STWVPA+KRRER  + A       
Subjt:  G--------FVYSGENSPA----RSSLVMVRSGGDGGGK-VISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA-------

Query:  --GGDS--KRPRDTHAAS------------SGFEIGNFPAEVNSTAVFRCTNPPAT----DQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPI---
           G+S  KR R+   A+            SG E+GNFPAEV+S+AVFRC    +     +++AYQTAV IGGHIFKGILYD GP       +N      
Subjt:  --GGDS--KRPRDTHAAS------------SGFEIGNFPAEVNSTAVFRCTNPPAT----DQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPI---

Query:  SASPDGGA----------LLITTAESAAP---------------LDPPPSYPAPLNSYIPAGTQFFQPPTS
        S+S  GGA          + + TA S+ P               +DP   YP P+N+++ AGTQFF  P S
Subjt:  SASPDGGA----------LLITTAESAAP---------------LDPPPSYPAPLNSYIPAGTQFFQPPTS

Q9XGX0 Protein SHORT INTERNODES1.4e-4037.76Show/hide
Query:  MAGFFPLGGGGGG--------SSGGEIIHPTDGLLWYKNYES---------------------------FETEQQQQ---------GGEGFVYSGEN--S
        MAGFF LG GGGG        ++       T+  LW +N  S                           F+ +QQQQ          G G   S  +   
Subjt:  MAGFFPLGGGGGG--------SSGGEIIHPTDGLLWYKNYES---------------------------FETEQQQQ---------GGEGFVYSGEN--S

Query:  PARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDS---------KRPRDTHAA-------
         +  +L+M+RSG   GG   SCQDCGNQ+KKDC HMRCRTCCKSRG  C THVKSTWVPA+KRRER  + + G           KR R+   A       
Subjt:  PARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDS---------KRPRDTHAA-------

Query:  -------SSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGAL---LITTAESAAPLDP
               +SG E+GNFP EV+S+AVFRC    + D    +YAY+TAV IGGH+FKG+LYD GP +           +S  GG+    LIT   SA+   P
Subjt:  -------SSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGAL---LITTAESAAPLDP

Query:  PPS--------------------YPAPLNSYIPAGTQFF
          S                    YP P+N+++  GT FF
Subjt:  PPS--------------------YPAPLNSYIPAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 71.6e-3940.96Show/hide
Query:  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRD--------------
        ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV A+KRRER  + A   +KR RD              
Subjt:  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRD--------------

Query:  -------------------THAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHH------------HHHHN
                            +A+SSG E  + P E++S AVFRC    + D    +YAYQTAV IGGH+FKGILYD GP   H            H HH 
Subjt:  -------------------THAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHH------------HHHHN

Query:  PPISASPDGGALLITTAESA--APLDPPPSYPA---PLNSYIPAGTQFF
          + ++P        TA +     +DP   Y A   P N+++  GT FF
Subjt:  PPISASPDGGALLITTAESA--APLDPPPSYPA---PLNSYIPAGTQFF

AT1G19790.2 SHI-related sequence 71.6e-3940.96Show/hide
Query:  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRD--------------
        ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV A+KRRER  + A   +KR RD              
Subjt:  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRD--------------

Query:  -------------------THAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHH------------HHHHN
                            +A+SSG E  + P E++S AVFRC    + D    +YAYQTAV IGGH+FKGILYD GP   H            H HH 
Subjt:  -------------------THAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHH------------HHHHN

Query:  PPISASPDGGALLITTAESA--APLDPPPSYPA---PLNSYIPAGTQFF
          + ++P        TA +     +DP   Y A   P N+++  GT FF
Subjt:  PPISASPDGGALLITTAESA--APLDPPPSYPA---PLNSYIPAGTQFF

AT1G75520.1 SHI-related sequence 54.5e-4238.04Show/hide
Query:  MAGFFPLGGGGGGSSGG-------------------------EIIHPTDGL-LWYKNYESFETEQQQQGGE------------GFVYSG-----ENSPAR
        MAGFF LGG    S+                           EI +   G  +W   Y   +  QQQQ  +            G V SG      N+ +R
Subjt:  MAGFFPLGGGGGGSSGG-------------------------EIIHPTDGL-LWYKNYESFETEQQQQGGE------------GFVYSG-----ENSPAR

Query:  SSLVMVRSGGDGGGKVI------SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA----------------------GGDS
        S    V S  + GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRERL + A                      GGD+
Subjt:  SSLVMVRSGGDGGGKVI------SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA----------------------GGDS

Query:  KRPRDTHA---------------ASSGFEIG-NFPAEVNSTAVFRCTNPPATDQ------YAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPD
           +D                  ++SG E+  + P EVNS A+FRC    + ++      YAYQTAV+IGGHIFKGILYD GP+   +HH N   S +  
Subjt:  KRPRDTHA---------------ASSGFEIG-NFPAEVNSTAVFRCTNPPATDQ------YAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPD

Query:  GGALLITTA------ESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
               T        +   LDP   YPA LNS+I AGT FF PP S
Subjt:  GGALLITTA------ESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related4.7e-4739.35Show/hide
Query:  MAGFFPLGGGGGGSSGG--------EIIHP----TDGLLWYKNYE-----------------------------------SFETEQQQQ--------GGE
        MAGFF L GGGGG  GG           +P    ++  LWY+N                                      F+ +Q QQ         G 
Subjt:  MAGFFPLGGGGGGSSGG--------EIIHP----TDGLLWYKNYE-----------------------------------SFETEQQQQ--------GGE

Query:  G--------FVYSGENSPA----RSSLVMVRSGGDGGGK-VISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA-------
        G        F  SGE S A     ++++M+RSGG GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF C THV+STWVPA+KRRER  + A       
Subjt:  G--------FVYSGENSPA----RSSLVMVRSGGDGGGK-VISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA-------

Query:  --GGDS--KRPRDTHAAS------------SGFEIGNFPAEVNSTAVFRCTNPPAT----DQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPI---
           G+S  KR R+   A+            SG E+GNFPAEV+S+AVFRC    +     +++AYQTAV IGGHIFKGILYD GP       +N      
Subjt:  --GGDS--KRPRDTHAAS------------SGFEIGNFPAEVNSTAVFRCTNPPAT----DQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPI---

Query:  SASPDGGA----------LLITTAESAAP---------------LDPPPSYPAPLNSYIPAGTQFFQPPTS
        S+S  GGA          + + TA S+ P               +DP   YP P+N+++ AGTQFF  P S
Subjt:  SASPDGGA----------LLITTAESAAP---------------LDPPPSYPAPLNSYIPAGTQFFQPPTS

AT5G66350.1 Lateral root primordium (LRP) protein-related1.0e-4137.76Show/hide
Query:  MAGFFPLGGGGGG--------SSGGEIIHPTDGLLWYKNYES---------------------------FETEQQQQ---------GGEGFVYSGEN--S
        MAGFF LG GGGG        ++       T+  LW +N  S                           F+ +QQQQ          G G   S  +   
Subjt:  MAGFFPLGGGGGG--------SSGGEIIHPTDGLLWYKNYES---------------------------FETEQQQQ---------GGEGFVYSGEN--S

Query:  PARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDS---------KRPRDTHAA-------
         +  +L+M+RSG   GG   SCQDCGNQ+KKDC HMRCRTCCKSRG  C THVKSTWVPA+KRRER  + + G           KR R+   A       
Subjt:  PARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDS---------KRPRDTHAA-------

Query:  -------SSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGAL---LITTAESAAPLDP
               +SG E+GNFP EV+S+AVFRC    + D    +YAY+TAV IGGH+FKG+LYD GP +           +S  GG+    LIT   SA+   P
Subjt:  -------SSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGAL---LITTAESAAPLDP

Query:  PPS--------------------YPAPLNSYIPAGTQFF
          S                    YP P+N+++  GT FF
Subjt:  PPS--------------------YPAPLNSYIPAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAAC
AGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTA
TTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACA
TGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGGTTTGAAATAGGGAATTT
CCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCA
TTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCA
CCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAAC
AGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTA
TTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACA
TGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGGTTTGAAATAGGGAATTT
CCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCA
TTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCA
CCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG
Protein sequenceShow/hide protein sequence
MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKST
WVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGALLITTAESAA
PLDPPPSYPAPLNSYIPAGTQFFQPPTS