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Carg05776 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05776
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionphosphatidylinositol transfer protein 3-like isoform X1
Genome locationCarg_Chr16:4392799..4401009
RNA-Seq ExpressionCarg05776
SyntenyCarg05776
Gene Ontology termsGO:0015914 - phospholipid transport (biological process)
GO:0120009 - intermembrane lipid transfer (biological process)
GO:0016020 - membrane (cellular component)
GO:0008526 - phosphatidylinositol transfer activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044746.1 random slug protein 5 [Cucumis melo var. makuwa]2.4e-1486.79Show/hide
Query:  FLAAHCSPLLIDMFRSKKHSQSHNH-HNNDSTQEDGKINELRAALGPLSSRSS
        +LAAHC+PLLIDMFRSKKHSQSHN+  +NDSTQE+GKINELRAALGPLSSRSS
Subjt:  FLAAHCSPLLIDMFRSKKHSQSHNH-HNNDSTQEDGKINELRAALGPLSSRSS
KAG6577254.1 hypothetical protein SDJN03_24828, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2786.42Show/hide
Query:  SKHSTNGFS-----GVSASGFLALYLLQVFLAAHCSPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        ++H  N F+     GVSASGFLALYLLQVFLAAHCSPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
Subjt:  SKHSTNGFS-----GVSASGFLALYLLQVFLAAHCSPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
KAG7015344.1 hypothetical protein SDJN02_22979, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-81100Show/hide
Query:  MIPILEDVSSRINRWFFAAVEAVHKPGFVSTSATAINCVSDLAPLKPRTTVSSCSPLLSHRLCNSFFRNKNNALCQEEGESKHSTNGFSGVSASGFLALY
        MIPILEDVSSRINRWFFAAVEAVHKPGFVSTSATAINCVSDLAPLKPRTTVSSCSPLLSHRLCNSFFRNKNNALCQEEGESKHSTNGFSGVSASGFLALY
Subjt:  MIPILEDVSSRINRWFFAAVEAVHKPGFVSTSATAINCVSDLAPLKPRTTVSSCSPLLSHRLCNSFFRNKNNALCQEEGESKHSTNGFSGVSASGFLALY

Query:  LLQVFLAAHCSPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        LLQVFLAAHCSPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
Subjt:  LLQVFLAAHCSPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
XP_022929512.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita moschata]8.4e-12100Show/hide
Query:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
Subjt:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
XP_023553217.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]2.7e-1095Show/hide
Query:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        MFRSKKHSQSHNH +NDSTQEDGKINELRAALGPLSSRSS
Subjt:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
TrEMBL top hitse value%identityAlignment
A0A0A0KWJ1 CRAL-TRIO domain-containing protein2.5e-0685Show/hide
Query:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        MFRSKKHSQ     NNDSTQE+GKINELRAALGPLSSRSS
Subjt:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
A0A1S3BX30 random slug protein 56.0e-0887.8Show/hide
Query:  MFRSKKHSQSHNH-HNNDSTQEDGKINELRAALGPLSSRSS
        MFRSKKHSQSHN+  +NDSTQE+GKINELRAALGPLSSRSS
Subjt:  MFRSKKHSQSHNH-HNNDSTQEDGKINELRAALGPLSSRSS
A0A5A7TRI3 Random slug protein 51.1e-1486.79Show/hide
Query:  FLAAHCSPLLIDMFRSKKHSQSHNH-HNNDSTQEDGKINELRAALGPLSSRSS
        +LAAHC+PLLIDMFRSKKHSQSHN+  +NDSTQE+GKINELRAALGPLSSRSS
Subjt:  FLAAHCSPLLIDMFRSKKHSQSHNH-HNNDSTQEDGKINELRAALGPLSSRSS
A0A6J1ESC3 phosphatidylinositol transfer protein 3-like isoform X14.0e-12100Show/hide
Query:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
Subjt:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
A0A6J1J6E4 phosphatidylinositol transfer protein 3-like isoform X13.2e-0990Show/hide
Query:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
        MFR KKHSQSHNHH+NDSTQEDGKI ELRAALGPLS RSS
Subjt:  MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCGATTCTGGAAGATGTTAGCAGTCGAATTAATAGGTGGTTCTTTGCTGCTGTTGAGGCGGTTCATAAGCCTGGTTTCGTTTCTACATCTGCAACCGCCATCAA
CTGCGTCTCGGATCTCGCGCCGTTGAAGCCAAGAACCACCGTTTCTTCATGTTCCCCTCTTCTCTCTCACCGTCTCTGCAACTCCTTTTTCCGTAACAAGAACAACGCCC
TTTGTCAGGAAGAAGGAGAATCAAAGCATTCAACCAATGGATTCTCTGGAGTTTCCGCTTCTGGTTTCTTAGCCCTCTACTTGCTTCAGGTTTTTCTTGCTGCACATTGT
TCTCCATTGCTGATTGATATGTTTCGTTCAAAGAAGCATTCTCAAAGTCATAATCACCATAATAATGATTCTACACAAGAAGACGGGAAGATCAATGAACTTAGGGCTGC
TCTTGGGCCTCTGTCTAGTCGAAGTTCA
mRNA sequenceShow/hide mRNA sequence
CCCATGAGCGATAATAATTCATCCACGTCATTCTATCTCAGCCGTCCACTTCTTCAACCAACTCCCTCATCGTTGCCGTCCATCTCGTTCCCTCTCTCCATAAAAGGTCA
AGAAGTTCCCTGGTTGCCCTAATCCATATGAGGATTCCATAAGGCTTCCTATTCCCTCCTCTTTTATTTTTCCATTTCTCGGTCGTGTAGATCTGTTGTGTTCTTATTGT
TCTCCGGTGCAGGAGGGCTAAGAATGGATCTTTCGACTTCTGAAGTCGTGTCTTTGCTCGCTGATTATTGTTTCCAACGATTTTCGGTGGCGGATTGTGGCTAATGATTC
CGATTCTGGAAGATGTTAGCAGTCGAATTAATAGGTGGTTCTTTGCTGCTGTTGAGGCGGTTCATAAGCCTGGTTTCGTTTCTACATCTGCAACCGCCATCAACTGCGTC
TCGGATCTCGCGCCGTTGAAGCCAAGAACCACCGTTTCTTCATGTTCCCCTCTTCTCTCTCACCGTCTCTGCAACTCCTTTTTCCGTAACAAGAACAACGCCCTTTGTCA
GGAAGAAGGAGAATCAAAGCATTCAACCAATGGATTCTCTGGAGTTTCCGCTTCTGGTTTCTTAGCCCTCTACTTGCTTCAGGTTTTTCTTGCTGCACATTGTTCTCCAT
TGCTGATTGATATGTTTCGTTCAAAGAAGCATTCTCAAAGTCATAATCACCATAATAATGATTCTACACAAGAAGACGGGAAGATCAATGAACTTAGGGCTGCTCTTGGG
CCTCTGTCTAGTCGAAGTTCA
Protein sequenceShow/hide protein sequence
MIPILEDVSSRINRWFFAAVEAVHKPGFVSTSATAINCVSDLAPLKPRTTVSSCSPLLSHRLCNSFFRNKNNALCQEEGESKHSTNGFSGVSASGFLALYLLQVFLAAHC
SPLLIDMFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSS