; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05831 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05831
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L29, chloroplastic-like
Genome locationCarg_Chr16:4699899..4703337
RNA-Seq ExpressionCarg05831
SyntenyCarg05831
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577307.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-79100Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

XP_022929361.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]3.4e-7598.77Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFS RVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAE
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEEAAE
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAE

XP_022977189.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]2.7e-7292.86Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MMNLSIASPSSV+ P+KFLSSTSKSSFNG QIRFPFSFRVPPK A TGGRNS VVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

XP_022985118.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]1.6e-7798.21Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAAC GGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEEAAEAAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

XP_023551880.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita pepo subsp. pepo]2.1e-7798.81Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MMNLSIASPSSVAIPAKFLSSTSKSSF+GLQIRFPFSFRVPPKAACTGGR SPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

TrEMBL top hitse value%identityAlignment
A0A5D3CWZ4 50S ribosomal protein L291.2e-6788.82Show/hide
Query:  MMNLSIAS-PSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACT-GGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE
        M+NLS+AS PS++ IP+KFL+STSKS FNGLQIRFPFSF VPPK A T GGRNS VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE
Subjt:  MMNLSIAS-PSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACT-GGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        FKSSEFRRMRKRI+RMLTVKREREIEEGVGKR+SRKLDRKWK+SIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

A0A6J1EMX4 50S ribosomal protein L29, chloroplastic-like1.6e-7598.77Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFS RVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAE
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEEAAE
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAE

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like3.7e-7292.26Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV+ P+KFLSSTSKSSFNG QIRFPFSFRVPPK A TGGRNS VVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like1.3e-7292.86Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MMNLSIASPSSV+ P+KFLSSTSKSSFNG QIRFPFSFRVPPK A TGGRNS VVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

A0A6J1JCM6 50S ribosomal protein L29, chloroplastic-like7.8e-7898.21Show/hide
Query:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAAC GGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEEAAEAAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA

SwissProt top hitse value%identityAlignment
B8HMR2 50S ribosomal protein L292.5e-0433.33Show/hide
Query:  ELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE
        ++KD+   +  E+  +++DLK +L  LRLQK+ R E K  +F+ +R ++A+++T++R+R++ +
Subjt:  ELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE

P82248 50S ribosomal protein L29, chloroplastic1.7e-3761.18Show/hide
Query:  SKSSFNGLQ---IRFPFSFRV----PPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARML
        +KSSF+GL+   +    S R+    PP         S VV+M K+E+ELK++R KT E++NEE++ LKGEL MLRLQ+SAR  FK S+F RMRKR+ARML
Subjt:  SKSSFNGLQ---IRFPFSFRV----PPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARML

Query:  TVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKS
        TVKREREIE+GVGKRLSRKLD+ WKRSIVVRPPPSLKKL+E+  A   AEK+
Subjt:  TVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKS

Q49ZG0 50S ribosomal protein L293.2e-0446.77Show/hide
Query:  KDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG
        K+IR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIE+G
Subjt:  KDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG

Q9FJP3 50S ribosomal protein L29, chloroplastic1.8e-4766.07Show/hide
Query:  MMNLSIASPSSVAIPAKFLSS--TSKSSFNGLQIRFPFSFRVPPKAACTGGRNSP-VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P + AI  +  +S  ++ SSF+G++I+   S RVP  A  +     P VVMM+KRE ELK+IR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MMNLSIASPSSVAIPAKFLSS--TSKSSFNGLQIRFPFSFRVPPKAACTGGRNSP-VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WK+SIV RPPPSLKKL+EEE A EAAE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAE

Q9SWI6 50S ribosomal protein L29, chloroplastic2.7e-3557.23Show/hide
Query:  MNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACT---GGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE
        M+L+ ASP + +IP    +    ++F  +++    + R    A  +     R + +V MAKRE+EL++IRA TTE++ EEVVDLKGEL +LRL++SAR E
Subjt:  MNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACT---GGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREE
        FK+SEF RMRKRIARMLTVKREREIE+G+ KRLSRKLDRKWK+SIVVRPPPSL+  +EE
Subjt:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein1.3e-4866.07Show/hide
Query:  MMNLSIASPSSVAIPAKFLSS--TSKSSFNGLQIRFPFSFRVPPKAACTGGRNSP-VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P + AI  +  +S  ++ SSF+G++I+   S RVP  A  +     P VVMM+KRE ELK+IR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MMNLSIASPSSVAIPAKFLSS--TSKSSFNGLQIRFPFSFRVPPKAACTGGRNSP-VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WK+SIV RPPPSLKKL+EEE A EAAE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACCTTTCAATTGCTTCGCCTTCGAGCGTTGCTATACCTGCAAAGTTTCTTAGCTCGACCTCCAAATCATCCTTCAATGGCCTTCAAATCCGTTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAGCAGCATGTACCGGAGGCCGCAATTCGCCGGTGGTAATGATGGCCAAGAGGGAGGAGGAGTTGAAAGATATCAGAGCCAAAACTACTGAGG
AAATAAACGAAGAGGTCGTCGATCTCAAGGGTGAACTTCTTATGCTTCGGCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACCGTAAAACGTGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGTTGTCAAGAAAGTTAGATAGAAAGTGGAAGAGAAGTATTGTGGTCAGACC
ACCTCCATCTCTGAAGAAGTTGCGAGAGGAAGAAGAAGCAGCTGAAGCAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
AATCGAAAATAACAATAATAGAAGGGGAGAGAGCTTATCTTCTTCTTGAATCGCAGGTGACTGAGCGAACTCTACGAACACACTCTGAACATGATGAACCTTTCAATTGC
TTCGCCTTCGAGCGTTGCTATACCTGCAAAGTTTCTTAGCTCGACCTCCAAATCATCCTTCAATGGCCTTCAAATCCGTTTCCCATTTTCGTTTCGCGTTCCTCCTAAAG
CAGCATGTACCGGAGGCCGCAATTCGCCGGTGGTAATGATGGCCAAGAGGGAGGAGGAGTTGAAAGATATCAGAGCCAAAACTACTGAGGAAATAAACGAAGAGGTCGTC
GATCTCAAGGGTGAACTTCTTATGCTTCGGCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGGATTGCTCGGATGCTAACCGT
AAAACGTGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGTTGTCAAGAAAGTTAGATAGAAAGTGGAAGAGAAGTATTGTGGTCAGACCACCTCCATCTCTGAAGAAGT
TGCGAGAGGAAGAAGAAGCAGCTGAAGCAGCTGAGAAATCTGCTTGATCCAATCAGATACGCTCTCAACTAATATGGTAGCTTTATGAGTGTTTGAAGTTGTTGAAATTG
CTATTTAAACAACGTTTTATAAGAAGATGAAAATTCTGATCATGTACTTAGCTTGTGCACAAATGGAATAGATTTCAAGGGGATCGTGTTGCGTTCATGTGCTTTCATAT
Protein sequenceShow/hide protein sequence
MMNLSIASPSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSPVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKR
IARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEEAAEAAEKSA