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Carg05887 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05887
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SPIRAL1-like 3
Genome locationCarg_Chr04:20933185..20936115
RNA-Seq ExpressionCarg05887
SyntenyCarg05887
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602534.1 putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4899.02Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  KS
        KS
Subjt:  KS

KAG7033210.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]5.6e-49100Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  KS
        KS
Subjt:  KS

XP_022134514.1 protein SPIRAL1-like 3 [Momordica charantia]1.2e-4086.79Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHI----PAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+K NGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHI----PAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGKS
        FGNG+S
Subjt:  FGNGKS

XP_022954496.1 protein SPIRAL1-like 3 [Cucurbita moschata]2.1e-4899.02Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  KS
        KS
Subjt:  KS

XP_038889735.1 protein SPIRAL1-like 1 [Benincasa hispida]7.1e-3681.37Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        M RGVSSGGGQSSLGYLFG GEPAN+VQ S+K+ GSSQ  +STS   DK  PAGIPG+ TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  KS
        +S
Subjt:  KS

TrEMBL top hitse value%identityAlignment
A0A067JWW4 Uncharacterized protein8.2e-3077.55Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG
        MGRGVS+GGGQSSLGYLFG GE ANN +A+K  + SSQ     SQP DK IPAGI GN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG

A0A5C7HMB5 Uncharacterized protein3.7e-3073.33Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKA-----NGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDF
        MGRGVS+GGGQSSLGYLFG GE ANNVQA +       N   Q  S  SQP DK IPAG+ GN TNNY RADGQNCGNFITDRPSTKVHAAPGGGSSL +
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKA-----NGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDF

Query:  LFGNG
        LFG G
Subjt:  LFGNG

A0A6J1BYY1 protein SPIRAL1-like 36.0e-4186.79Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHI----PAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+K NGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHI----PAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGKS
        FGNG+S
Subjt:  FGNGKS

A0A6J1GRA9 protein SPIRAL1-like 31.0e-4899.02Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  KS
        KS
Subjt:  KS

A0A6J1JRI1 protein SPIRAL1-like 31.0e-4899.02Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  KS
        KS
Subjt:  KS

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 11.7e-2462.5Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQASK------KANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGG
        MGRGVS GGGQSSLGYLFG GE   PA NN  A         A+ S +  ++ +    K IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGG
Subjt:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQASK------KANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGG

Query:  SSLDFLFGNGKS
        SSLD+LFG G S
Subjt:  SSLDFLFGNGKS

Q2QQ99 Protein SPIRAL1-like 39.0e-2664.36Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG
        MGRGVSSGGGQSSLGYLFGGGE     ++++K     +P  S+S    K IPAGI  +  NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG

Query:  K
        K
Subjt:  K

Q2R0W8 Protein SPIRAL1-like 23.8e-2459.09Show/hide
Query:  GRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPT-------------SSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPG
        GRGVSSGGGQSSLGYLFGGGE A   +A   A    + T             S ++    K IPAGI     NNY RA GQNCGNF+TDRPSTKVHAAPG
Subjt:  GRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPT-------------SSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPG

Query:  GGSSLDFLFG
        GGSSL +LFG
Subjt:  GGSSLDFLFG

Q7Y1L9 Protein SPIRAL1-like 11.0e-2156.03Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSS-------QPTSSTSQPAD----------KHIPAGIPGNHT-NNYHRADGQNCGNFITDRPSTK
        M RG S+GGGQSSLGYLFGG E      A+K A  ++        P ++ + PA+          K IPAGI G+ + NNYHRADGQN GNF+TDRPSTK
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSS-------QPTSSTSQPAD----------KHIPAGIPGNHT-NNYHRADGQNCGNFITDRPSTK

Query:  VHAAPGGGSSLDFLFG
        VHAAPGGGSSL +LFG
Subjt:  VHAAPGGGSSLDFLFG

Q9LE54 Protein SPIRAL1-like 25.8e-2558.18Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSS
        MGRGVS+GGGQSSLGYLFG GE       N   A  +++  + PT + +  A    K +PAG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSS
Subjt:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSS

Query:  LDFLFGNGKS
        LD+LFG G +
Subjt:  LDFLFGNGKS

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.2e-2562.5Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQASK------KANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGG
        MGRGVS GGGQSSLGYLFG GE   PA NN  A         A+ S +  ++ +    K IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGG
Subjt:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQASK------KANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGG

Query:  SSLDFLFGNGKS
        SSLD+LFG G S
Subjt:  SSLDFLFGNGKS

AT1G69230.1 SPIRAL1-like24.2e-2658.18Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSS
        MGRGVS+GGGQSSLGYLFG GE       N   A  +++  + PT + +  A    K +PAG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSS
Subjt:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSS

Query:  LDFLFGNGKS
        LD+LFG G +
Subjt:  LDFLFGNGKS

AT1G69230.2 SPIRAL1-like24.2e-2658.18Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSS
        MGRGVS+GGGQSSLGYLFG GE       N   A  +++  + PT + +  A    K +PAG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSS
Subjt:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSS

Query:  LDFLFGNGKS
        LD+LFG G +
Subjt:  LDFLFGNGKS

AT2G03680.1 spiral18.1e-2258.33Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPA-NNVQASKKA-----NGSSQP----------TSSTS-QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPST
        MGRG S GGGQSSL YLFGG  PA   V A + A     NG + P          T++TS +PA+  K IPAGI     NNY RA+GQN GNF+TDRPST
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPA-NNVQASKKA-----NGSSQP----------TSSTS-QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPST

Query:  KVHAAPGGGSSLDFLFGNGK
        KVHAAPGGGSSLD+LF  GK
Subjt:  KVHAAPGGGSSLDFLFGNGK

AT2G03680.2 spiral18.1e-2258.33Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPA-NNVQASKKA-----NGSSQP----------TSSTS-QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPST
        MGRG S GGGQSSL YLFGG  PA   V A + A     NG + P          T++TS +PA+  K IPAGI     NNY RA+GQN GNF+TDRPST
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPA-NNVQASKKA-----NGSSQP----------TSSTS-QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPST

Query:  KVHAAPGGGSSLDFLFGNGK
        KVHAAPGGGSSLD+LF  GK
Subjt:  KVHAAPGGGSSLDFLFGNGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGTGGAGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAAGCCAATGGATCTTC
TCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACT
TTATCACGGATCGTCCATCGACCAAGGTTCACGCTGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAA
mRNA sequenceShow/hide mRNA sequence
AATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCAAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTCGATCCCATTTTCA
TTCACATAACATTTTGGAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGTGGAGAGCCGGC
CAACAATGTGCAAGCTTCTAAGAAAGCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTA
ACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCTGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTC
GGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCCCC
TCATGGTCAGAACTGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCG
CCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAAATTGACAGTCCACCCTTTCTG
Protein sequenceShow/hide protein sequence
MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS