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Carg05933 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05933
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCOX assembly mitochondrial protein
Genome locationCarg_Chr04:21203331..21203640
RNA-Seq ExpressionCarg05933
SyntenyCarg05933
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKA++ECDHYAS+YAEC Y + LSVVF CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
KAG7033256.1 hypothetical protein SDJN02_07310, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-32100Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]3.4e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKAL+ECDHYAS+YAEC Y + LSV+F CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
XP_022938373.1 uncharacterized protein DDB_G0275933 [Cucurbita moschata]4.5e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKA++ECDHYAS+YAEC Y + LSVVF CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
XP_022993759.1 uncharacterized protein DDB_G0275933 [Cucurbita maxima]4.5e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKA++ECDHYAS+YAEC Y + LSVVF CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
TrEMBL top hitse value%identityAlignment
A0A0A0KVX6 COX assembly mitochondrial protein1.1e-1563.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKAL+ECD YAS+YAEC Y + LSVVF CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
A0A1S3CA82 COX assembly mitochondrial protein1.7e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKAL+ECDHYAS+YAEC Y + LSV+F CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
A0A6J1BW91 COX assembly mitochondrial protein8.2e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKAL+ECDHYASRYAEC Y + LSVV+ CR+QA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
A0A6J1FIP8 COX assembly mitochondrial protein2.2e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKA++ECDHYAS+YAEC Y + LSVVF CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
A0A6J1K100 COX assembly mitochondrial protein2.2e-1663.01Show/hide
Query:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        MGY+Q+ARENHVKKK EE               ALRSK+KQKA++ECDHYAS+YAEC Y + LSVVF CRNQA
Subjt:  MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like1.1e-1250.7Show/hide
Query:  YLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA
        Y++ ARENHVKKK EE               ALRSK+K KAL ECD Y S+YA+C   +  SVV+ CR QA
Subjt:  YLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTACTTGCAGGATGCTCGAGAGAATCATGTGAAGAAGAAAGCAGAGGAAGTCTTGTATCTTGCAACTGCTGTTGAAACTTCTGGTGTGTTTCCAGCTTTGCGTAG
CAAAATTAAGCAGAAGGCGTTGAGGGAGTGCGATCATTACGCCTCGAGGTATGCCGAATGCGTCTACGCCAAAGCGTTATCTGTTGTTTTCAACTGTCGCAATCAAGCTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTACTTGCAGGATGCTCGAGAGAATCATGTGAAGAAGAAAGCAGAGGAAGTCTTGTATCTTGCAACTGCTGTTGAAACTTCTGGTGTGTTTCCAGCTTTGCGTAG
CAAAATTAAGCAGAAGGCGTTGAGGGAGTGCGATCATTACGCCTCGAGGTATGCCGAATGCGTCTACGCCAAAGCGTTATCTGTTGTTTTCAACTGTCGCAATCAAGCTT
AA
Protein sequenceShow/hide protein sequence
MGYLQDARENHVKKKAEEVLYLATAVETSGVFPALRSKIKQKALRECDHYASRYAECVYAKALSVVFNCRNQA