| GenBank top hits | e value | %identity | Alignment |
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| BBH06854.1 RNA polymerase II, Rpb4, core protein [Prunus dulcis] | 8.0e-58 | 92.74 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKY+QLQQMS+DP NQVSQVFEKSLQYVKRFSRYKNPDAV+QLCVLGNLCPETVEEAIAMVPS+KA
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGRVHDD+AI+KMLNDL+LIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| KAA3479871.1 DNA-directed RNA polymerase II subunit RPB4 [Gossypium australe] | 3.6e-58 | 93.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILEHKYEQLQQMS+DPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPS+K
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGR HDD+AIE+MLNDLSLIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| KAG6773620.1 hypothetical protein POTOM_020911 [Populus tomentosa] | 5.5e-59 | 95.16 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIGD+FLKAKCLMNCEV+LILEHKYEQLQQMS+DPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPS+K
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGR HDDEAIEKMLNDLSLIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| KAG7033258.1 DNA-directed RNA polymerase II subunit 4 [Cucurbita argyrosperma subsp. argyrosperma] | 3.5e-61 | 100 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGRVHDDEAIEKMLNDLSLIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| XP_022954766.1 DNA-directed RNA polymerase II subunit 4 [Cucurbita moschata] | 2.8e-58 | 89.86 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ LCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
Query: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
Subjt: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0B0NCZ0 DNA-directed RNA polymerase II subunit RPB4 | 1.7e-58 | 93.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILEHKYEQLQQMS+DPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPS+K
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGR HDD+AIE+MLNDLSLIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| A0A0D2S1E3 RPOL4c domain-containing protein | 1.7e-58 | 93.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILEHKYEQLQQMS+DPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPS+K
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGR HDD+AIE+MLNDLSLIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| A0A2P5QBV6 Uncharacterized protein | 1.7e-58 | 93.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILEHKYEQLQQMS+DPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPS+K
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQLCVLGNLCPETVEEAIAMVPSLKA
Query: KGRVHDDEAIEKMLNDLSLIKKFE
KGR HDD+AIE+MLNDLSLIKKFE
Subjt: KGRVHDDEAIEKMLNDLSLIKKFE
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| A0A6J1GS12 DNA-directed RNA polymerase II subunit 4 | 1.3e-58 | 89.86 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ LCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
Query: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
Subjt: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
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| A0A6J1JHK7 DNA-directed RNA polymerase II subunit 4 | 1.3e-58 | 89.86 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ LCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
Query: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
Subjt: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 1.0e-15 | 34.31 | Show/hide |
Query: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVR--------------QLCVLGNLCPET
+G+ EE+A++L EF A+ L+N EV ++LEH+ +Q + ++ ++S+VF K+L Y RFSR+KN + + +L L NLCPET
Subjt: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVR--------------QLCVLGNLCPET
Query: VEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
EE+ A++PSL+ + +DE ++++L+D+ + F+
Subjt: VEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
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| O48890 DNA-directed RNA polymerase II subunit 4 | 9.8e-59 | 84.78 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHK+EQLQQ+SEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ LCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------LCVLGNLCPE
Query: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
TVEEA+AMVPSLK KGR HDDEAIEKMLNDLSL+K+FE
Subjt: TVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 4.0e-12 | 32.65 | Show/hide |
Query: EEEENAAELKIGDEFLKAKCLMNCEVSLILEHK----------YEQ---LQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------
+EEE+ LK + AK L+N EV+++LEH+ + Q L + + +N + + F K+L Y ++FSRYKN +++Q
Subjt: EEEENAAELKIGDEFLKAKCLMNCEVSLILEHK----------YEQ---LQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ--------------
Query: LCVLGNLCPETVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKF
+ L NLCPE +EA +++PSLK ++ DDE ++ +L++LS ++KF
Subjt: LCVLGNLCPETVEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKF
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 1.0e-15 | 34.31 | Show/hide |
Query: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVR--------------QLCVLGNLCPET
+G+ EE+A++L EF A+ L+N EV ++LEH+ +Q + ++ ++S+VF K+L Y RFSR+KN + + +L L NLCPET
Subjt: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVR--------------QLCVLGNLCPET
Query: VEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
EE+ A++PSL+ + +DE ++++L+D+ + F+
Subjt: VEEAIAMVPSLKAKGRVHDDEAIEKMLNDLSLIKKFE
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| Q9VEA5 DNA-directed RNA polymerase II subunit Rpb4 | 2.0e-11 | 33.33 | Show/hide |
Query: EENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVR--------------QLCVLGNLCPETVEEA
+E+AA+L+ EF A+ L+ EV ++L+H+ + Q S D + S+VF K+ Y F ++KN + + +L LGNLCPE EEA
Subjt: EENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVR--------------QLCVLGNLCPETVEEA
Query: IAMVPSLKAKGRVHDDEAIEKMLNDL
A++PSL+ + +DE + ++L+D+
Subjt: IAMVPSLKAKGRVHDDEAIEKMLNDL
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