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Carg05950 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05950
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHIG1 domain-containing protein
Genome locationCarg_Chr04:21266377..21266840
RNA-Seq ExpressionCarg05950
SyntenyCarg05950
Gene Ontology termsGO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process)
GO:0005746 - mitochondrial respirasome (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain
IPR040153 - Respiratory supercomplex factor 2, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578469.1 hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2980.46Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPG
        MEAIQAW+S+HKLTSIGALWASGIGASL YT+S TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE +  GV      SA  VPG
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPG
KAG6602595.1 hypothetical protein SDJN03_07828, partial [Cucurbita argyrosperma subsp. sororia]5.0e-30100Show/hide
Query:  GALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK
        GALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK
Subjt:  GALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK
KAG7016034.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2881.71Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSA
        MEAIQAW+S+HKLTSIGALWASGIGASL YT+S TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE +  GV      SA
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSA
KAG7033273.1 hypothetical protein SDJN02_07327, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-39100Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK
        MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK
XP_004138401.1 uncharacterized protein LOC101218681 [Cucumis sativus]5.2e-2790Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKE
        MEAIQAW+SEHKLT+IGALWASGIGASL YT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ +
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKE
TrEMBL top hitse value%identityAlignment
A0A067JNW4 HIG1 domain-containing protein6.2e-2676Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVA
        ME +Q+W+S+HKLTSIGALWA+ +G SL YT++RTPLKPSLRLIHARMHAQA+TLAVLSGAA+YHYYEK+++ VA
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVA
A0A0A0K7T4 HIG1 domain-containing protein2.5e-2790Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKE
        MEAIQAW+SEHKLT+IGALWASGIGASL YT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ +
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKE
A0A540LHQ1 HIG1 domain-containing protein8.1e-2683.1Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEK
        MEAIQ+W+SEHKLTSIG +WAS +GASL Y+K+RTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE+ +
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEK
A0A5A7UEZ1 Respiratory supercomplex factor 2-like protein5.6e-2788.57Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKE
        MEAIQAW+SEHKLT+IGALWASG+GASL YT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ +
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKE
A0A7J7I509 HIG1 domain-containing protein2.8e-2686.96Show/hide
Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK
        MEA+Q+W+SEHKLTSIG LWASGIGASL Y++++TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05550.1 Hypoxia-responsive family protein1.5e-1655.22Show/hide
Query:  EAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE
        E I+ W+S+HKL ++G LW SGI  S+ Y  S+  +K S+++IHAR+HAQALTLA L+GAAV  YY+
Subjt:  EAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE
AT5G27760.1 Hypoxia-responsive family protein4.0e-1755.41Show/hide
Query:  IQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADR
        I+ WI EHKL ++G LW SGI  S+ Y  S+  +K S+R+IHAR+HAQALTLA L+GAA   YY+  K G  DR
Subjt:  IQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATTCAAGCTTGGATTTCTGAACACAAACTCACCAGCATTGGAGCTCTGTGGGCGTCTGGGATTGGAGCCTCGCTGGTGTACACAAAATCAAGAACTCCCCT
GAAGCCAAGTCTCCGGCTTATTCATGCCAGGATGCATGCTCAGGCTTTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGGAGAAGAAAGGCG
TCGCCGATCGAACCAAGGTTTCCGCTTCCGCCGTGCCGGGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATTCAAGCTTGGATTTCTGAACACAAACTCACCAGCATTGGAGCTCTGTGGGCGTCTGGGATTGGAGCCTCGCTGGTGTACACAAAATCAAGAACTCCCCT
GAAGCCAAGTCTCCGGCTTATTCATGCCAGGATGCATGCTCAGGCTTTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGGAGAAGAAAGGCG
TCGCCGATCGAACCAAGGTTTCCGCTTCCGCCGTGCCGGGGAAGTAGGATTGGCGGCGCACCCGGGACGGAAAGGGAATGGA
Protein sequenceShow/hide protein sequence
MEAIQAWISEHKLTSIGALWASGIGASLVYTKSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTKVSASAVPGK