CuGenDBv2

Gene ID	Carg05960
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DCD domain-containing protein
Genome location	Carg_Chr04:21301392..21302544
RNA-Seq Expression	Carg05960
Synteny	Carg05960
Gene Ontology terms	GO:0034976 - response to endoplasmic reticulum stress (biological process)
InterPro domains	IPR013989 - Development/cell death domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602604.1 hypothetical protein SDJN03_07837, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-23

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Query:  YFAGKIPTSLDVRWQCDLKECR--FRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        +FAGK PTSLDV+WQCDLKE R  FRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
Subjt:  YFAGKIPTSLDVRWQCDLKECR--FRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

KAG7033283.1 hypothetical protein SDJN02_07337, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.3e-33

100

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Query:  MAVEGRLSPYFAGKIPTSLDVRWQCDLKECRFRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        MAVEGRLSPYFAGKIPTSLDVRWQCDLKECRFRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
Subjt:  MAVEGRLSPYFAGKIPTSLDVRWQCDLKECRFRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

XP_008441487.1 PREDICTED: ring canal kelch homolog isoform X1 [Cucumis melo]

1.2e-07

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

XP_016899395.1 PREDICTED: uncharacterized protein LOC103485594 isoform X3 [Cucumis melo]

1.2e-07

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

XP_038885976.1 uncharacterized protein LOC120076281 [Benincasa hispida]

2.4e-08

82.86

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEATS G+ NISPYAW ADGMDYTPYSAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B344 uncharacterized protein LOC103485594 isoform X2

5.8e-08

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

A0A1S3B4B6 ring canal kelch homolog isoform X1

5.8e-08

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

A0A1S4DTS8 uncharacterized protein LOC103485594 isoform X4

5.8e-08

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

A0A1S4DUJ9 uncharacterized protein LOC103485594 isoform X3

5.8e-08

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

A0A5A7UGQ1 Ring canal kelch-like protein isoform X1

5.8e-08

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        RK HG+FEAT  G  NISPYAWTADGMDYTP+SAQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G11000.1 DCD (Development and Cell Death) domain protein

1.0e-04

51.43

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        R  HG+FEA S+G  NI   AW+ +G D +PY AQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

AT3G11000.2 DCD (Development and Cell Death) domain protein

1.0e-04

51.43

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Query:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ
        R  HG+FEA S+G  NI   AW+ +G D +PY AQ
Subjt:  RKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

Sequences

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CDS sequence

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ATGGCGGTGGAAGGAAGACTGAGTCCTTACTTTGCAGGAAAAATCCCTACCTCCTTGGACGTAAGATGGCAGTGTGATCTCAAGGAATGTCGTTTTAGGAAGTTTCATGG
TGTATTTGAGGCTACTAGCCAAGGTGACCAGAATATTAGTCCATATGCTTGGACTGCTGATGGCATGGATTATACTCCATATTCTGCACAG

mRNA sequence

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Protein sequence

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MAVEGRLSPYFAGKIPTSLDVRWQCDLKECRFRKFHGVFEATSQGDQNISPYAWTADGMDYTPYSAQ

Carg05960 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome