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Carg05961 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05961
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionring canal kelch homolog isoform X1
Genome locationCarg_Chr04:21302723..21303412
RNA-Seq ExpressionCarg05961
SyntenyCarg05961
Gene Ontology termsNA
InterPro domainsIPR013989 - Development/cell death domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441487.1 PREDICTED: ring canal kelch homolog isoform X1 [Cucumis melo]3.3e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

XP_008441488.1 PREDICTED: uncharacterized protein LOC103485594 isoform X2 [Cucumis melo]3.3e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

XP_016899395.1 PREDICTED: uncharacterized protein LOC103485594 isoform X3 [Cucumis melo]3.3e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

XP_016899396.1 PREDICTED: uncharacterized protein LOC103485594 isoform X4 [Cucumis melo]3.3e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

XP_038885976.1 uncharacterized protein LOC120076281 [Benincasa hispida]1.2e-3555Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVS---HRNDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFS SPILETVS     +   K+LQTINVRE S NSEV                      S T+ REDGE+ +K T ELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVS---HRNDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSASC--------FGDVAENIKGDALFKSDEENLLEDNHEDIQT
        +S Y+WE  SC  HS EEESKSC AP N         E   ++SSY DV VE +EYKSA+           D AEN++GDA F SDEEN LEDNHEDIQT
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSASC--------FGDVAENIKGDALFKSDEENLLEDNHEDIQT

TrEMBL top hitse value%identityAlignment
A0A1S3B344 uncharacterized protein LOC103485594 isoform X21.6e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

A0A1S3B4B6 ring canal kelch homolog isoform X11.6e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

A0A1S4DTS8 uncharacterized protein LOC103485594 isoform X41.6e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

A0A1S4DUJ9 uncharacterized protein LOC103485594 isoform X31.6e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

A0A5A7UGQ1 Ring canal kelch-like protein isoform X11.6e-3049.24Show/hide
Query:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN
        FWFELDQRQ NRLIALFSSSPI+ TVS         +ALQT+N+RE +NNS+                       S T+ REDGE+ +K TSELNLSNSN
Subjt:  FWFELDQRQINRLIALFSSSPILETVSHR---NDFSKALQTINVREASNNSEV----------------------SPTNAREDGENLRKPTSELNLSNSN

Query:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED
        +S YEWE+  C  HS EEES++CEA +N   +     E  +++SS  DV VE EEYKSA        S   D AEN+KGDAL++SDEE   E   E+
Subjt:  HSGYEWEDLSCTSHSPEEESKSCEAPSNECPLFKSGNE--IYSSSYSDVIVEDEEYKSA--------SCFGDVAENIKGDALFKSDEENLLEDNHED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAAAGCTTTTTTTGGTTTGAACTGGACCAACGACAGATAAACAGGTTGATTGCTTTGTTTTCATCTTCACCTATCTTGGAGACTGTTTCCCATCGCAATGATTT
CTCGAAAGCTTTGCAAACTATCAATGTAAGAGAAGCCAGCAACAATAGTGAGGTCTCCCCTACAAATGCGAGAGAGGATGGTGAAAATTTAAGGAAACCAACATCTGAAT
TAAACCTTTCTAATTCAAATCATTCTGGCTACGAGTGGGAGGACCTTTCTTGTACATCACATTCTCCTGAAGAAGAAAGCAAGTCTTGTGAAGCTCCTTCCAATGAATGT
CCATTGTTCAAATCAGGAAATGAAATATACTCTTCTTCCTATTCTGATGTCATAGTTGAAGATGAAGAGTACAAGTCAGCGAGCTGCTTTGGAGATGTAGCAGAAAATAT
CAAAGGCGATGCACTTTTCAAAAGCGATGAAGAGAATTTGTTAGAGGATAATCACGAGGATATTCAGACTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAAAGCTTTTTTTGGTTTGAACTGGACCAACGACAGATAAACAGGTTGATTGCTTTGTTTTCATCTTCACCTATCTTGGAGACTGTTTCCCATCGCAATGATTT
CTCGAAAGCTTTGCAAACTATCAATGTAAGAGAAGCCAGCAACAATAGTGAGGTCTCCCCTACAAATGCGAGAGAGGATGGTGAAAATTTAAGGAAACCAACATCTGAAT
TAAACCTTTCTAATTCAAATCATTCTGGCTACGAGTGGGAGGACCTTTCTTGTACATCACATTCTCCTGAAGAAGAAAGCAAGTCTTGTGAAGCTCCTTCCAATGAATGT
CCATTGTTCAAATCAGGAAATGAAATATACTCTTCTTCCTATTCTGATGTCATAGTTGAAGATGAAGAGTACAAGTCAGCGAGCTGCTTTGGAGATGTAGCAGAAAATAT
CAAAGGCGATGCACTTTTCAAAAGCGATGAAGAGAATTTGTTAGAGGATAATCACGAGGATATTCAGACTCTTTGA
Protein sequenceShow/hide protein sequence
MSQSFFWFELDQRQINRLIALFSSSPILETVSHRNDFSKALQTINVREASNNSEVSPTNAREDGENLRKPTSELNLSNSNHSGYEWEDLSCTSHSPEEESKSCEAPSNEC
PLFKSGNEIYSSSYSDVIVEDEEYKSASCFGDVAENIKGDALFKSDEENLLEDNHEDIQTL