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Carg05997 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05997
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionimmediate early response 3-interacting protein 1-like
Genome locationCarg_Chr04:21465998..21467143
RNA-Seq ExpressionCarg05997
SyntenyCarg05997
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR013880 - Yos1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002280168.3 PREDICTED: immediate early response 3-interacting protein 1 [Vitis vinifera]6.8e-3189.61Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSF+GQLIGLIYATQYLRVPL++LN ICI +KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

XP_012088078.1 immediate early response 3-interacting protein 1 [Jatropha curcas]5.2e-3190.91Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFS+FSGGRTKSF+GQLIGLIYATQY+RVPL++LN ICI VKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

XP_022133684.1 immediate early response 3-interacting protein 1-like [Momordica charantia]8.0e-3293.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSF+GQLIGL YATQYLRVPL+MLN ICIF+KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

XP_022134292.1 immediate early response 3-interacting protein 1-like [Momordica charantia]5.2e-3193.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRG SFS+FSGGRTKSF+GQLIGLIYATQYLRVPL+MLN ICIFVKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

XP_022961355.1 immediate early response 3-interacting protein 1-like [Cucurbita moschata]2.9e-34100Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

TrEMBL top hitse value%identityAlignment
A0A6J1BWQ3 immediate early response 3-interacting protein 1-like3.9e-3293.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSF+GQLIGL YATQYLRVPL+MLN ICIF+KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

A0A6J1C1M0 immediate early response 3-interacting protein 1-like2.5e-3193.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRG SFS+FSGGRTKSF+GQLIGLIYATQYLRVPL+MLN ICIFVKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

A0A6J1HBY6 immediate early response 3-interacting protein 1-like1.4e-34100Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

A0A6J1JQY6 immediate early response 3-interacting protein 1-like1.4e-34100Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

D7TMI4 Uncharacterized protein3.3e-3189.61Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSF+GQLIGLIYATQYLRVPL++LN ICI +KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

SwissProt top hitse value%identityAlignment
P85007 Immediate early response 3-interacting protein 15.1e-0537.18Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG
        L++L++  LL  NA+A+L+E+RFL   GW      G  G     + QL+ LI + +  +RVPL+++N I I + L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG

Q1JQC2 Immediate early response 3-interacting protein 13.0e-0538.46Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG
        L++LL+  LL  NA+A+L+E+RFL   GW      G  G     + QL+ LI + +  +RVPL+++N I I + L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG

Q3B8G7 Immediate early response 3-interacting protein 11.0e-0538.46Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG
        L+TLL+  LL  NA+A+L+E+RFL+  GW      G  G     + QL+ LI + +  +RVPL+++N + I + L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG

Q4VBI2 Immediate early response 3-interacting protein 11.7e-0535.9Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG
        L+ L++  +L  NA+A+L+E+RFL+  GW      G  G     + QL+ LI + +  +RVPL+ +N +CI + L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG

Q9Y5U9 Immediate early response 3-interacting protein 13.0e-0538.46Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG
        L++LL+  LL  NA+A+L+E+RFL   GW      G  G     + QL+ LI + +  +RVPL+++N I I + L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLRVPLMMLNVICIFVKLVSG

Arabidopsis top hitse value%identityAlignment
AT2G37975.1 Yos1-like protein1.2e-2060.26Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MG WTL+EG LL ANALAILNEDRFLAP+GW+ ++    G+  S +GQ+IGLI+A  Y+R+PLM+ N+I I  KL SG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

AT3G54085.1 Yos1-like protein4.4e-2060.26Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MG WTLL+G LL ANALAILNEDRFL PRGW+  +     R  S +GQ+IGLI+A QY+R+PLM++N   I +KL+SG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

AT3G54085.2 Yos1-like protein4.4e-2060.26Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG
        MG WTLL+G LL ANALAILNEDRFL PRGW+  +     R  S +GQ+IGLI+A QY+R+PLM++N   I +KL+SG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGTGGACACTTCTAGAAGGCTGCCTGCTACTCGCCAATGCTCTAGCGATTCTAAACGAAGATCGGTTTCTTGCTCCTAGAGGATGGAGCTTCTCAGACTTCTC
AGGCGGCAGAACCAAGTCATTCAGGGGGCAGCTTATAGGGCTTATCTATGCAACACAATATCTAAGAGTTCCTCTCATGATGCTCAATGTCATCTGCATCTTTGTCAAAT
TGGTATCAGGATGA
mRNA sequenceShow/hide mRNA sequence
TAAGATTTGAATAAAGAAAAAGAAAGCATTTTGTGATGCAATTGTAACAGGTTGTGCGGGTCATTCTCGGGTTCACTCTGCGATCTGTAGCGGCTTCACAACCGGCCATT
TCCAACTCCTCCGCTCTCTCCGATCAGCAACATGTAATTGTTATAATGTCGAATTACATGGTTGTATGGTTACAATTTGTGGAGATTAATTTCAGAGTATGGAATTCTGT
ATCTTTTGGAGGACTGTTCCCCGAGTTCTTTGCAACACAGATAATAAATGGGATTGTGGACACTTCTAGAAGGCTGCCTGCTACTCGCCAATGCTCTAGCGATTCTAAAC
GAAGATCGGTTTCTTGCTCCTAGAGGATGGAGCTTCTCAGACTTCTCAGGCGGCAGAACCAAGTCATTCAGGGGGCAGCTTATAGGGCTTATCTATGCAACACAATATCT
AAGAGTTCCTCTCATGATGCTCAATGTCATCTGCATCTTTGTCAAATTGGTATCAGGATGATAACTACCGTTGTGGCAGGTTTGCACTTCCTTCCATTTTGAGAAAGTAT
TTCCGGTGTATTGTTCTTGATTTAGTATGGCCTTTGTTGGTTTGAATGTAACGAACAATAGGCTGCTATGAGATAACTATAACATCTGAGAGTTAGAAACATGCATTTTC
ATA
Protein sequenceShow/hide protein sequence
MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG