; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06001 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06001
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTIP41-like protein
Genome locationCarg_Chr04:21480356..21481513
RNA-Seq ExpressionCarg06001
SyntenyCarg06001
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602637.1 hypothetical protein SDJN03_07870, partial [Cucurbita argyrosperma subsp. sororia]5.4e-98100Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
        QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF

Query:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
Subjt:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

KAG7033322.1 hypothetical protein SDJN02_07377, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-106100Show/hide
Query:  MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPA
        MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPA
Subjt:  MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPA

Query:  GGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        GGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
Subjt:  GGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

XP_022957513.1 uncharacterized protein LOC111458886 [Cucurbita moschata]1.2e-9296.57Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
        QVQKVGQDLVLQALRASAWERQA VGW AQPHRKPDIQ+RERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF

Query:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFN WLSSS DSRKNPLLPL PRSIRAEGAVKQELHLPQEWTY
Subjt:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

XP_022990001.1 uncharacterized protein LOC111487028 isoform X1 [Cucurbita maxima]1.3e-8691.48Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV
        QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR  GGTGSL H PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGV
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV

Query:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        FLPRRHVNPS+CRHKQGSPAINFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP  SIRAEGAVKQELHLPQEWTY
Subjt:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

XP_023515357.1 uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo]9.3e-9093.71Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
        QVQKVGQDLVLQALRASAWERQA VGWSAQPHRKP+IQNRERNIV+VTSRC GGTGSLYHS WIPPHQNQHPPPNASAMRCI PAGGSAIKRASSGTGVF
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF

Query:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSS DSRKNPLLP  PR+IRAEGAVK ELHLPQEWTY
Subjt:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

TrEMBL top hitse value%identityAlignment
A0A5A7TJ83 Uncharacterized protein1.1e-5665.75Show/hide
Query:  QVQKVGQDLVLQALRASA-WERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV
        QVQ+V QDLVLQALRAS+   RQA V WSAQPH K +IQNRERN+VN + RC  G G LYHSPW+PP QNQ P PN + +RCI P   S +KRASSGTGV
Subjt:  QVQKVGQDLVLQALRASA-WERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV

Query:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSID----SRKNPLLPLPPRSIRAEGAVKQE-LHLPQEWTY
        FLPRR++NP+DCR KQG P++ F EEMKS IQAP NG LS   D     R NPLLPL PRS R EG + QE  HLPQEWTY
Subjt:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSID----SRKNPLLPLPPRSIRAEGAVKQE-LHLPQEWTY

A0A6J1BYQ6 uncharacterized protein LOC1110066792.9e-5766.48Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
        QVQ+V  DLVLQA+ AS+W RQA V W+A PHRKP+IQNRERNI     RC G  G LY S W+PP Q+Q PPPNASA+RCI P GG A+KRASSGTGVF
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF

Query:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDS----RKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        LPRR+VNPS+CR KQG+PA+ F EEM + IQAPFNG LS   D+    R   LLPL PRS+R E A+ QELHLPQEWTY
Subjt:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDS----RKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

A0A6J1H0F4 uncharacterized protein LOC1114588865.7e-9396.57Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
        QVQKVGQDLVLQALRASAWERQA VGW AQPHRKPDIQ+RERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVF

Query:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFN WLSSS DSRKNPLLPL PRSIRAEGAVKQELHLPQEWTY
Subjt:  LPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

A0A6J1JLQ9 uncharacterized protein LOC111487028 isoform X16.1e-8791.48Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV
        QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR  GGTGSL H PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGV
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV

Query:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        FLPRRHVNPS+CRHKQGSPAINFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP  SIRAEGAVKQELHLPQEWTY
Subjt:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

A0A6J1JS02 uncharacterized protein LOC111487028 isoform X26.1e-8791.48Show/hide
Query:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV
        QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR  GGTGSL H PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGV
Subjt:  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGV

Query:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
        FLPRRHVNPS+CRHKQGSPAINFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP  SIRAEGAVKQELHLPQEWTY
Subjt:  FLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G55690.1 unknown protein2.9e-0432.98Show/hide
Query:  SAIKRASSGTGVFLPRRHVNPSDC-RHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPP-RS----IRAEGAVKQELHLPQEWTY
        +A+K  S+GTGVFLPR++ NPSD  + K G   +    + K  I+          +  + N    L   RS    +   G +K E  L QEW Y
Subjt:  SAIKRASSGTGVFLPRRHVNPSDC-RHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPP-RS----IRAEGAVKQELHLPQEWTY

AT5G59050.1 unknown protein2.2e-0431.62Show/hide
Query:  HQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI----NFTEEMK------------SSIQAPFNGWL-----SSSIDSR
        HQNQ P     A+       GS  +  S GTGVFLPR H    + R K G   +       E +K            SS   PF+  L     +  I S 
Subjt:  HQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI----NFTEEMK------------SSIQAPFNGWL-----SSSIDSR

Query:  KNPLLPLPPRSIRAEGAVKQELH------LPQEWTY
        KN  L         E  +  E H      LPQEWTY
Subjt:  KNPLLPLPPRSIRAEGAVKQELH------LPQEWTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACA
AGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGT
ACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCC
GGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGC
CCCATTCAACGGCTGGCTGTCATCCAGCATCGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACC
TACCTCAAGAATGGACATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACA
AGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGT
ACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCC
GGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGC
CCCATTCAACGGCTGGCTGTCATCCAGCATCGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACC
TACCTCAAGAATGGACATACTGATGAAGAACGAAGCAGAGAACACTGAATCCATTTGTTTTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAATATTAAT
TTATGCAGAAGGGTGATCTTGGACGAAGAGAATGAAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGTATAGGTTTAGAATAAAGAAGGAAGGGTTGCAGTGGGTGAAG
GAAGAAGATGAAGAGGTTGAGAAGAAAAGGACAGGACAGAGATATGTTGTGTCCTACTAATAATAAATCTGTAATTTTGTGCCATAGTGATTTTAGATTTATGTTTTTTT
TTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTGTTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTCAA
Protein sequenceShow/hide protein sequence
MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASS
GTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY