; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06006 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06006
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMaternal effect embryo arrest
Genome locationCarg_Chr04:21504590..21505108
RNA-Seq ExpressionCarg06006
SyntenyCarg06006
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138443.1 uncharacterized protein LOC101208865 [Cucumis sativus]7.2e-8190.7Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SPNCLA P+VA NLV+FHVYSFSSFLFSSLIALGLKQAIRI+K+PFYHPTEFF+RVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTA+RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP ALV+YICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

XP_022134461.1 uncharacterized protein LOC111006700 [Momordica charantia]5.0e-8291.86Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLAAP++AENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        K+A+RIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

XP_022962637.1 uncharacterized protein LOC111463051 [Cucurbita moschata]3.0e-8799.42Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLA PNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

XP_022990564.1 uncharacterized protein LOC111487406 [Cucurbita maxima]1.0e-87100Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

XP_038885575.1 uncharacterized protein LOC120075905 [Benincasa hispida]2.9e-8293.02Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNL++SPNCLA P+VA NLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTAVR+GMLVSGIGSVCGCGFLMMALINVVQIKLG LSCGSSQT+AAVVPLVILVPFALVIYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

TrEMBL top hitse value%identityAlignment
A0A0A0KA88 Uncharacterized protein3.5e-8190.7Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SPNCLA P+VA NLV+FHVYSFSSFLFSSLIALGLKQAIRI+K+PFYHPTEFF+RVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTA+RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP ALV+YICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

A0A5D3DL39 Uncharacterized protein1.3e-8090.7Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SP+CLA P+VA NLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEF +RVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTA+RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP ALV+YICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

A0A6J1BXU9 uncharacterized protein LOC1110067002.4e-8291.86Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLAAP++AENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        K+A+RIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

A0A6J1HD70 uncharacterized protein LOC1114630511.5e-8799.42Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLA PNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

A0A6J1JSD7 uncharacterized protein LOC1114874065.0e-88100Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
        MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVN

Query:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
        KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Subjt:  KTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01580.1 unknown protein4.4e-2841.92Show/hide
Query:  TNIHMSALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTA
        T++H++ALDGIV+ NS+FT+AVF+G++++ P+D T  L +   C A  +V  +LV F V SF+ FLFSSL+A G+K AI +  +       F   +N+  
Subjt:  TNIHMSALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTA

Query:  VRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF
        +R G++ +  GS+ GC FL++++++V+Q++LG LSCG++     V+ LV+LV  AL +YI  V Y+F
Subjt:  VRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF

AT3G07510.1 unknown protein2.2e-3248.19Show/hide
Query:  TNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAV
        T++H+SALDG+VNVNS+FT+AVF+GL+       ++L +  +C A+ +VA+ L+ F V SFS FLFSSL+A GLK A+ +  +   +   F   +N   +
Subjt:  TNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAV

Query:  RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF
        R GM+ S +GSV GC FLM++++NV+QI+LG LSCGS     AV  LV LV  AL+IYI    YAF
Subjt:  RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF

AT3G07510.2 unknown protein2.2e-3248.19Show/hide
Query:  TNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAV
        T++H+SALDG+VNVNS+FT+AVF+GL+       ++L +  +C A+ +VA+ L+ F V SFS FLFSSL+A GLK A+ +  +   +   F   +N   +
Subjt:  TNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAV

Query:  RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF
        R GM+ S +GSV GC FLM++++NV+QI+LG LSCGS     AV  LV LV  AL+IYI    YAF
Subjt:  RIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF

AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)1.8e-3451.85Show/hide
Query:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPN--DPTNNLVESPN----CLAA--PNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYH-
        +PT T IH++A+DGIVNVNS+F+LA+FLGL  + N   P ++     +    C++A  P +AE LV+ HVYSFS FLFSSLIA+ LKQAIR + T     
Subjt:  MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPN--DPTNNLVESPN----CLAA--PNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYH-

Query:  --PTEFFV------RVNKTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALVIYICLVSYAFI
            E  V      RVN  A+R+G++ S + SV GCGFL MAL+++VQIKLG L C  S    AA+VPLV+LVP AL+IY+ LV YAFI
Subjt:  --PTEFFV------RVNKTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALVIYICLVSYAFI

AT5G05950.1 maternal effect embryo arrest 606.3e-5969.36Show/hide
Query:  TNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYH------PTEFFVR
        T+IH++ALDGIVNVNS+FTLAVF+GLAWNP DP N+LV  PNC+    +AENLVAFHVYSF+SFLFSSLIALGLKQA+R++    +H      P  ++  
Subjt:  TNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYH------PTEFFVR

Query:  VNKTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALVIYICLVSYAF
        VNKTA+R GM+ SG+GSVCGCGFLM+ALINVVQIKLGTL CG+S  TYAAVVPLVILVP AL IY+ L+ YAF
Subjt:  VNKTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALVIYICLVSYAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACCGGCACCAACATTCACATGTCCGCCCTAGACGGCATCGTAAACGTCAATTCCATGTTCACTCTGGCCGTCTTCTTAGGCTTAGCCTGGAACCCCAACGACCC
GACGAACAATCTGGTCGAAAGCCCTAATTGCTTGGCCGCCCCCAACGTCGCCGAGAATCTGGTAGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAA
TCGCCCTCGGCCTTAAGCAGGCCATCCGGATCTCCAAAACCCCCTTCTATCACCCCACCGAGTTCTTCGTTCGCGTCAACAAAACGGCCGTCCGAATCGGGATGCTGGTT
TCCGGAATCGGCTCGGTTTGCGGCTGTGGATTCCTCATGATGGCGCTTATCAATGTTGTCCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGC
GGTGGTTCCGCTCGTGATTTTGGTTCCATTTGCCCTTGTGATTTACATCTGCCTTGTTTCTTACGCTTTTATCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGACCGGCACCAACATTCACATGTCCGCCCTAGACGGCATCGTAAACGTCAATTCCATGTTCACTCTGGCCGTCTTCTTAGGCTTAGCCTGGAACCCCAACGACCC
GACGAACAATCTGGTCGAAAGCCCTAATTGCTTGGCCGCCCCCAACGTCGCCGAGAATCTGGTAGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAA
TCGCCCTCGGCCTTAAGCAGGCCATCCGGATCTCCAAAACCCCCTTCTATCACCCCACCGAGTTCTTCGTTCGCGTCAACAAAACGGCCGTCCGAATCGGGATGCTGGTT
TCCGGAATCGGCTCGGTTTGCGGCTGTGGATTCCTCATGATGGCGCTTATCAATGTTGTCCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGC
GGTGGTTCCGCTCGTGATTTTGGTTCCATTTGCCCTTGTGATTTACATCTGCCTTGTTTCTTACGCTTTTATCAATTAG
Protein sequenceShow/hide protein sequence
MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLV
SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN