; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06043
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationCarg_Chr04:21649047..21651328
RNA-Seq ExpressionCarg06043
SyntenyCarg06043
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602677.1 hypothetical protein SDJN03_07910, partial [Cucurbita argyrosperma subsp. sororia]1.1e-13699.62Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALP ADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

KAG7033363.1 frr [Cucurbita argyrosperma subsp. argyrosperma]1.3e-137100Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

XP_022953011.1 uncharacterized protein LOC111455524 [Cucurbita moschata]1.1e-13699.62Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNFLLLRNFANPSRNFSFFV DLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

XP_022990977.1 uncharacterized protein LOC111487708 [Cucurbita maxima]1.6e-13598.48Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSF YR+FLLLRNFANPSRNFSFFVNDLCNPWTSEMPG FALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

XP_023544000.1 uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]5.3e-13699.24Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNFLLLRNFANPSRN SFFVNDLCN WTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

TrEMBL top hitse value%identityAlignment
A0A1S3B2S9 Ribosome-recycling factor, chloroplastic4.0e-12188.59Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNF++LRNFAN + NFSF +N   N WTS+    FALPP+DFIRESRRGFAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SGV++PLNQIAAVSVLDSKTLSINPYDP+TLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE+LCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

A0A5D3DLY3 Ribosome-recycling factor, chloroplastic4.0e-12188.59Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNF++LRNFAN + NFSF +N   N WTS+    FALPP+DFIRESRRGFAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SGV++PLNQIAAVSVLDSKTLSINPYDP+TLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE+LCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

A0A6J1BWU9 Ribosome-recycling factor, chloroplastic9.5e-12390.49Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRS SYRNFLL RN A PSR FSFFVND    WTSE PG FALPPADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKKFIKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

A0A6J1GLU1 Ribosome-recycling factor, chloroplastic5.2e-13799.62Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSFSYRNFLLLRNFANPSRNFSFFV DLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

A0A6J1JKE4 Ribosome-recycling factor, chloroplastic7.5e-13698.48Show/hide
Query:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL
        MAMFLKRSF YR+FLLLRNFANPSRNFSFFVNDLCNPWTSEMPG FALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISAL

Query:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
        CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG

SwissProt top hitse value%identityAlignment
B8DSA1 Ribosome-recycling factor3.2e-2739.11Show/hide
Query:  TIKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIP
        +I  +A  +ME A+ +L  E +KLRTGRAS+ ++D+I V+  G   P++Q+A+VSV DS+TL+I P+D +  + +E AI+ S LGL P  DG+ +   IP
Subjt:  TIKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIP

Query:  PLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI
        PLT+E  + + K+  K  E+++ ++R  R+ A D +KK+       +DD+++   +V +LT +F+  +++ C AKEKEI
Subjt:  PLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI

Q313G7 Ribosome-recycling factor5.5e-2740.22Show/hide
Query:  TIKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIP
        TI      +ME A++AL  E  +LRTGRAS+ ++D I V+  G   P+NQ+A+V+V DS+T++I P+D      +E AI+ S LGL P  DG+ +   +P
Subjt:  TIKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIP

Query:  PLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI
        PLT+E  + + K+  K  ED++ ++R  R+ A + +KKM    +  +DDMKR + EV +LT  F+  +E +   KEKEI
Subjt:  PLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI

Q5L0J9 Ribosome-recycling factor9.4e-2738.51Show/hide
Query:  ASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKE
        A  +M+ A+ A + EL+ +R GRA++G+L+ + V+  GV  P+NQ+A++SV +++ L I PYD + +K +E AI++S LGL P  DG  +  VIPPLT+E
Subjt:  ASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKE

Query:  HIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI
          + + KLV K  ED++ ++R  R+ A D +KK+  +    +D+++    EV +LT   I   + + K KEKE+
Subjt:  HIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI

Q5WFT1 Ribosome-recycling factor1.1e-2738.76Show/hide
Query:  IKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPP
        IKA+A ++M+ AI  LS EL+KLR GRA+  +LD + VE  G + PLNQ+A+V+V +++ L I PYD   + ++E AI+ S LGL P  DG+ +   IPP
Subjt:  IKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPP

Query:  LTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI
        LT+E  + + +LV+K  E+S+ ++R  R+ A D +KK+       +D+++    ++ +LT  ++   ++  K KE+EI
Subjt:  LTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI

Q9KA66 Ribosome-recycling factor1.9e-2741.14Show/hide
Query:  NASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTK
        +A  +M  A  AL  EL+KLR GRA+  MLD I VE  G   PLNQ+A +SV +++ L I P+D +++ ++E AI  S LGL P  DG  +   IPPLT+
Subjt:  NASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTK

Query:  EHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKK--MSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI
        E  + + KLV K  E+++ ++R  R+ A D +KK        +DD++R+ ++V +LT K+I+  +   +AKEKEI
Subjt:  EHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKK--MSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor5.1e-8464.93Show/hide
Query:  MAMFLKRSFSYRN---FLLLRNFANPSRNFSFFVNDLCNPWTSEMPG---AFALPPADFIRESRRGFAKGRKS-NESSTSMAEALPDIRPTIKANASSQM
        MAMF++R+ S RN   FL   +    SR+FSF    + +P    M G    F L   DF+R+SRRGFAKG+KS ++S T M +A PDI PT+KA ASSQM
Subjt:  MAMFLKRSFSYRN---FLLLRNFANPSRNFSFFVNDLCNPWTSEMPG---AFALPPADFIRESRRGFAKGRKS-NESSTSMAEALPDIRPTIKANASSQM

Query:  EAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAM
        EAAI ALS +L+KLRTGRA+ GMLDHI+VE  GV+MPLN +A VSVLD KTLS+NPYDP+T+K LE AIV+SPLGL P++DG+RL+A IP LTKEHIQAM
Subjt:  EAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAM

Query:  CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEIT
        CK+VTK  E  +QSIRRARQKA+DT+KK  SS PKD++KRLEKEVDELTKKF+KSAED+CK+KEKEIT
Subjt:  CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEIT

AT3G63190.1 ribosome recycling factor, chloroplast precursor8.5e-2334.25Show/hide
Query:  RPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAV
        +  I+ +  S+ME  I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D  +L + PYD ++LK +E AIV+S LG+ P  DG+ +   
Subjt:  RPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAV

Query:  IPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI
        +PPLT +  + + K+V K  E+ + ++R  R+ A+ +  K+       +D++K L  ++ +L   ++K  E+L K KEKE+
Subjt:  IPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGTTTCTCAAACGTTCTTTCTCCTACAGGAATTTCCTTCTTCTCCGAAATTTTGCCAATCCAAGTCGTAACTTTTCCTTCTTCGTTAACGATCTCTGTAATCC
TTGGACCTCCGAGATGCCTGGAGCCTTTGCTCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGTCGGGGATTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTA
TGGCTGAAGCATTACCTGATATTAGACCAACTATTAAAGCAAACGCTAGCTCACAGATGGAGGCTGCGATATCTGCATTATCAGGAGAATTGAGCAAACTTCGAACAGGA
AGGGCATCATCTGGAATGCTTGACCACATTATAGTAGAAATTTCAGGTGTGAGGATGCCGCTGAATCAGATCGCAGCTGTTTCGGTCTTGGATTCAAAAACACTGTCAAT
AAATCCTTATGATCCTAATACACTAAAGAACTTAGAGAGTGCTATAGTTTCATCTCCTCTAGGTTTAGCGCCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCAC
CATTGACCAAAGAGCATATCCAGGCTATGTGTAAGCTGGTCACCAAGTGTTGTGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCAATGGATACAGTAAAA
AAGATGAGCTCAAGCTACCCGAAGGATGACATGAAAAGATTGGAAAAGGAAGTAGATGAATTGACCAAGAAGTTTATCAAGTCAGCTGAAGACCTCTGCAAGGCTAAGGA
GAAGGAGATCACTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
TAGCTAGAAAGCTTAGCAAGCATCGAGATGATCAAATAAGTCCGGGATTTCGATCCGTTCAAGCACGACGGTCTTCTTCAATGGCCATGTTTCTCAAACGTTCTTTCTCC
TACAGGAATTTCCTTCTTCTCCGAAATTTTGCCAATCCAAGTCGTAACTTTTCCTTCTTCGTTAACGATCTCTGTAATCCTTGGACCTCCGAGATGCCTGGAGCCTTTGC
TCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGTCGGGGATTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTATGGCTGAAGCATTACCTGATATTAGACCAA
CTATTAAAGCAAACGCTAGCTCACAGATGGAGGCTGCGATATCTGCATTATCAGGAGAATTGAGCAAACTTCGAACAGGAAGGGCATCATCTGGAATGCTTGACCACATT
ATAGTAGAAATTTCAGGTGTGAGGATGCCGCTGAATCAGATCGCAGCTGTTTCGGTCTTGGATTCAAAAACACTGTCAATAAATCCTTATGATCCTAATACACTAAAGAA
CTTAGAGAGTGCTATAGTTTCATCTCCTCTAGGTTTAGCGCCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAGCATATCCAGGCTATGT
GTAAGCTGGTCACCAAGTGTTGTGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCAATGGATACAGTAAAAAAGATGAGCTCAAGCTACCCGAAGGATGAC
ATGAAAAGATTGGAAAAGGAAGTAGATGAATTGACCAAGAAGTTTATCAAGTCAGCTGAAGACCTCTGCAAGGCTAAGGAGAAGGAGATCACTGGAGGTTGAATATTTGG
AAAAGAAGATTATCTCGTTCTCAATTTTGACAGATTAATTTAAACTCTATTATAGAGCTTTTCATAACCCATTTTGAGGGATGAAACAGAGGCGAACATCTGTCATATTT
GGAAACATAGACGCAATCCAAATGAATTCTGTGGTGTTGTTTTCACCTGAATGGATTCACATGTGGCAACAAGTATTAGGGTTTGCTTCTTCCAACTC
Protein sequenceShow/hide protein sequence
MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTG
RASSGMLDHIIVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVK
KMSSSYPKDDMKRLEKEVDELTKKFIKSAEDLCKAKEKEITGG