; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06045 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06045
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionActin-related protein 2/3 complex subunit 5
Genome locationCarg_Chr04:21657728..21660556
RNA-Seq ExpressionCarg06045
SyntenyCarg06045
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR006789 - Actin-related protein 2/3 complex subunit 5
IPR036743 - Actin-related protein 2/3 complex subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010089302.1 actin-related protein 2/3 complex subunit 5A [Morus notabilis]4.3e-6595.45Show/hide
Query:  SDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
        +DAFV ADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
Subjt:  SDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP

Query:  TCDQCLRIHEKLTEKAGLGCILRALADTINTV
        TCDQCLRIHEKLTE+AGLGCILR+LADT+NTV
Subjt:  TCDQCLRIHEKLTEKAGLGCILRALADTINTV

XP_022922855.1 actin-related protein 2/3 complex subunit 5A isoform X1 [Cucurbita moschata]1.3e-6697.06Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST
        MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM   +YLYRGLST
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST

Query:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV

XP_022922896.1 actin-related protein 2/3 complex subunit 5A isoform X2 [Cucurbita moschata]1.4e-68100Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
        MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR

Query:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV

XP_022989957.1 actin-related protein 2/3 complex subunit 5A isoform X1 [Cucurbita maxima]1.1e-6596.32Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST
        MSDAFV ADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM   +YLYRGLST
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST

Query:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV

XP_022989961.1 actin-related protein 2/3 complex subunit 5A isoform X2 [Cucurbita maxima]1.2e-6799.25Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
        MSDAFV ADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR

Query:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV

TrEMBL top hitse value%identityAlignment
A0A6J1E4Q3 Actin-related protein 2/3 complex subunit 56.4e-6797.06Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST
        MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM   +YLYRGLST
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST

Query:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV

A0A6J1E5D8 Actin-related protein 2/3 complex subunit 56.8e-69100Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
        MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR

Query:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV

A0A6J1JH92 Actin-related protein 2/3 complex subunit 55.4e-6696.32Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST
        MSDAFV ADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM   +YLYRGLST
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM---KYLYRGLST

Query:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  GDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV

A0A6J1JLM3 Actin-related protein 2/3 complex subunit 55.8e-6899.25Show/hide
Query:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
        MSDAFV ADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
Subjt:  MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR

Query:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
        PTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Subjt:  PTCDQCLRIHEKLTEKAGLGCILRALADTINTV

W9R3V7 Actin-related protein 2/3 complex subunit 52.1e-6595.45Show/hide
Query:  SDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
        +DAFV ADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
Subjt:  SDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP

Query:  TCDQCLRIHEKLTEKAGLGCILRALADTINTV
        TCDQCLRIHEKLTE+AGLGCILR+LADT+NTV
Subjt:  TCDQCLRIHEKLTEKAGLGCILRALADTINTV

SwissProt top hitse value%identityAlignment
B3H6Y2 Actin-related protein 2/3 complex subunit 5B1.2e-5480Show/hide
Query:  AFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        AFV ADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD PTC
Subjt:  AFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTEKAGLGCILRALADTINTV
        +QCL IHEKLTE+AGLGCILR L+DT NTV
Subjt:  DQCLRIHEKLTEKAGLGCILRALADTINTV

O15511 Actin-related protein 2/3 complex subunit 51.5e-0932.38Show/hide
Query:  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC

Query:  ILRAL
        I+R L
Subjt:  ILRAL

Q5R516 Actin-related protein 2/3 complex subunit 51.5e-0932.38Show/hide
Query:  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC

Query:  ILRAL
        I+R L
Subjt:  ILRAL

Q6DE18 Actin-related protein 2/3 complex subunit 5-B9.1e-1031.43Show/hide
Query:  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC
        +++SL++Q + + A ++AL  SP N++++  K     +V + L + K  +++   ++LDP   D+LMKY+Y+G       +    L+ HEK     GLG 
Subjt:  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC

Query:  ILRAL
        I+R L
Subjt:  ILRAL

Q9M117 Actin-related protein 2/3 complex subunit 5A3.3e-6088.37Show/hide
Query:  FVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCD
        FV ADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCD
Subjt:  FVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCD

Query:  QCLRIHEKLTEKAGLGCILRALADTINTV
        QCL+IHEKLTE+AGLGCILR L DTINTV
Subjt:  QCLRIHEKLTEKAGLGCILRALADTINTV

Arabidopsis top hitse value%identityAlignment
AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc)2.3e-6188.37Show/hide
Query:  FVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCD
        FV ADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCD
Subjt:  FVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCD

Query:  QCLRIHEKLTEKAGLGCILRALADTINTV
        QCL+IHEKLTE+AGLGCILR L DTINTV
Subjt:  QCLRIHEKLTEKAGLGCILRALADTINTV

AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc)8.6e-5680Show/hide
Query:  AFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        AFV ADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD PTC
Subjt:  AFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTEKAGLGCILRALADTINTV
        +QCL IHEKLTE+AGLGCILR L+DT NTV
Subjt:  DQCLRIHEKLTEKAGLGCILRALADTINTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGATGCATTTGTGGGAGCAGATAATGCCGAAGCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAGTCTAAAACAGTCGAAGC
TCTAAAAACTGCTCTCGAAGGTTCGCCTCCGAATACACGAGATGAGCGCTGCAAGTCGGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGACGTAGATG
GGATGTTTTCTTCGTTGGATCCGGAGTATTATGATATCCTAATGAAGTATTTGTACAGAGGGTTGTCAACTGGTGATCGCCCCACATGTGATCAGTGTCTCAGGATACAT
GAAAAATTGACAGAAAAGGCTGGCTTAGGCTGCATTCTCCGTGCCCTTGCAGATACTATCAACACAGTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCGTTTCTCATTATCTTCGTTTCTGCTGCTGCCGTTGCTAGTCGCCGGTCGTCGGTACGCCCCCACCGCCACGTTTTTTTTCCTTCTCTTCTTATATCCTTCCCTGC
TGCAACCTCGCGCCACCATGGGGTTTCCTAACAGAGGCTAAGTTCGAGGAAATTCTACTGAAGGTTGGGTGATAGGCGAAAATGTCAGATGCATTTGTGGGAGCAGATAA
TGCCGAAGCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAGTCTAAAACAGTCGAAGCTCTAAAAACTGCTCTCGAAGGTTCGCCTC
CGAATACACGAGATGAGCGCTGCAAGTCGGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGACGTAGATGGGATGTTTTCTTCGTTGGATCCGGAGTAT
TATGATATCCTAATGAAGTATTTGTACAGAGGGTTGTCAACTGGTGATCGCCCCACATGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAAGGCTGGCTTAGG
CTGCATTCTCCGTGCCCTTGCAGATACTATCAACACAGTTTGATTTTCCTTAACTTGACAGAACACTGCGAGCCCTCCCCTCTTTGGCCGATGTCTAAAATCATATTATT
TTCTCTCAGTGTATGTGAAATTGCTTTTCAAAGAATGTTTGTATTAAGCTGAGTAGACGTCTATATCTGTCACATTATATTAGAAAAAACAGGTACTGAATTTCATTGAG
TTCAGGATACTTTGAATTGCATTATTTTGAAGAACGTGTAAGTATTGTTATTTGTTTGGCTAGATTGGAAGGGACCAAAATATGTATGCCTCATTTATTCGTTCAGGATT
ATACACAACTTGTAGGAATTACTTTCCTACTTCAAGAAATATGACTCCC
Protein sequenceShow/hide protein sequence
MSDAFVGADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIH
EKLTEKAGLGCILRALADTINTV