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Carg06053 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06053
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF 3339)
Genome locationCarg_Chr04:21689299..21690931
RNA-Seq ExpressionCarg06053
SyntenyCarg06053
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015947.1 hypothetical protein SDJN02_21051, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

KAG7033373.1 hypothetical protein SDJN02_07429, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-82100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNVNVYVNTDSDDQYGEYAEENDSVHQNGNPTGIHIPKLHHPDSRRQLKKQPWRQDNEQRHR
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNVNVYVNTDSDDQYGEYAEENDSVHQNGNPTGIHIPKLHHPDSRRQLKKQPWRQDNEQRHR
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNVNVYVNTDSDDQYGEYAEENDSVHQNGNPTGIHIPKLHHPDSRRQLKKQPWRQDNEQRHR

Query:  HNNRSPVCTHLNLQEEEECSEVVEFLFNKGFGRIAIKMIKACGIHCTMMQE
        HNNRSPVCTHLNLQEEEECSEVVEFLFNKGFGRIAIKMIKACGIHCTMMQE
Subjt:  HNNRSPVCTHLNLQEEEECSEVVEFLFNKGFGRIAIKMIKACGIHCTMMQE

XP_011649954.2 uncharacterized protein LOC101211888 [Cucumis sativus]4.3e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

XP_023551540.1 uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo]4.3e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

XP_038884726.1 uncharacterized protein LOC120075418 [Benincasa hispida]4.3e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

TrEMBL top hitse value%identityAlignment
A0A0A0LMK8 Uncharacterized protein2.1e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

A0A1S3B371 uncharacterized protein LOC103485472 isoform X22.1e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

A0A1S3B3X3 uncharacterized protein LOC103485472 isoform X12.1e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

A0A6J1FLS0 uncharacterized protein LOC1114451202.1e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

A0A6J1K207 uncharacterized protein LOC1114894122.1e-13100Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein3.9e-1272.5Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        M+DWAPV++GVVLFV+LSPGLLF  PGNNR  +FG +KTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

AT3G48660.1 Protein of unknown function (DUF 3339)2.3e-0956.25Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN-VNVYVNT
        M+DW PVV+ V+LFVLL+PGLLFQ P   R  EFG+M+T+  ++ V+T
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN-VNVYVNT

AT5G40970.1 Protein of unknown function (DUF 3339)7.3e-1167.5Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        M+DWAPV++GVVLFV+LSPGLLF  PG++   +FG MKTN
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

AT5G50560.1 Protein of unknown function (DUF 3339)4.0e-0962.5Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        M++W PVV+  VLFV+LSPGLLFQ PGNN   +FG M+T+
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN

AT5G50660.1 Protein of unknown function (DUF 3339)4.0e-0962.5Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
        M++W PVV+  VLFV+LSPGLLFQ PGNN   +FG M+T+
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATTGGGCGCCAGTGGTGATCGGAGTTGTTCTGTTCGTGCTGCTTTCGCCAGGGCTTCTGTTCCAGTTCCCGGGGAATAATCGGCAGTTTGAGTTCGGGAGTAT
GAAGACTAACGTTAACGTGTATGTGAATACCGATAGCGATGACCAATATGGTGAGTATGCAGAAGAAAATGATAGCGTGCACCAAAATGGCAATCCCACTGGTATTCATA
TTCCCAAACTCCACCACCCTGATTCTCGCCGGCAACTGAAAAAGCAACCCTGGCGACAGGACAATGAACAGCGCCACCGCCACAACAACCGGTCCCCAGTCTGCACTCAT
CTCAATCTACAAGAGGAGGAGGAGTGTTCTGAAGTAGTGGAGTTCCTCTTCAACAAAGGTTTTGGAAGAATTGCCATAAAGATGATTAAAGCTTGTGGAATTCATTGTAC
CATGATGCAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATTGGGCGCCAGTGGTGATCGGAGTTGTTCTGTTCGTGCTGCTTTCGCCAGGGCTTCTGTTCCAGTTCCCGGGGAATAATCGGCAGTTTGAGTTCGGGAGTAT
GAAGACTAACGTTAACGTGTATGTGAATACCGATAGCGATGACCAATATGGTGAGTATGCAGAAGAAAATGATAGCGTGCACCAAAATGGCAATCCCACTGGTATTCATA
TTCCCAAACTCCACCACCCTGATTCTCGCCGGCAACTGAAAAAGCAACCCTGGCGACAGGACAATGAACAGCGCCACCGCCACAACAACCGGTCCCCAGTCTGCACTCAT
CTCAATCTACAAGAGGAGGAGGAGTGTTCTGAAGTAGTGGAGTTCCTCTTCAACAAAGGTTTTGGAAGAATTGCCATAAAGATGATTAAAGCTTGTGGAATTCATTGTAC
CATGATGCAGGAATGA
Protein sequenceShow/hide protein sequence
MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNVNVYVNTDSDDQYGEYAEENDSVHQNGNPTGIHIPKLHHPDSRRQLKKQPWRQDNEQRHRHNNRSPVCTH
LNLQEEEECSEVVEFLFNKGFGRIAIKMIKACGIHCTMMQE