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Carg06070 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06070
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:21763460..21764898
RNA-Seq ExpressionCarg06070
SyntenyCarg06070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7391113.1 unnamed protein product [Spirodela intermedia]3.7e-0655.74Show/hide
Query:  MAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR
        MAVP+TWL N+D GE S             AVETM I+TPQAA+ A TPP  APAHAPI +
Subjt:  MAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR

KAB8096156.1 hypothetical protein EE612_024508 [Oryza sativa]1.3e-1975.38Show/hide
Query:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR
        MTHP+AVPITWLTN+D G+ SV YPVLKSCIRSDAV+TM IITPQAA P +TPP +APAHAP ++
Subjt:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR

KAF7024446.1 hypothetical protein CFC21_036796 [Triticum aestivum]6.3e-0657.14Show/hide
Query:  MAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAH
        M VP+TWLT   RGE SV YPVLKS ++S+AVET    TPQ  +  TTPP   P H
Subjt:  MAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAH

KAF7031435.1 hypothetical protein CFC21_042763 [Triticum aestivum]1.3e-0658.93Show/hide
Query:  MAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAH
        M VP+TWLT   RGE SV YPVLKS ++S+AVETM   TPQ  +  TTPP   P H
Subjt:  MAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAH

KAG7033390.1 hypothetical protein SDJN02_07446, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-107100Show/hide
Query:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKDMWQCGYGYGCNHNISSNGKPGGNLIFEEELSPP
        MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKDMWQCGYGYGCNHNISSNGKPGGNLIFEEELSPP
Subjt:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKDMWQCGYGYGCNHNISSNGKPGGNLIFEEELSPP

Query:  FVIKRNIGGRRSGSIRDWDYIFLFQLAVQTYKSCCQHLYKVVTPITQNQGNGDKHLKPQTELLRTLMRHHREEADEADDEKETNNPS
        FVIKRNIGGRRSGSIRDWDYIFLFQLAVQTYKSCCQHLYKVVTPITQNQGNGDKHLKPQTELLRTLMRHHREEADEADDEKETNNPS
Subjt:  FVIKRNIGGRRSGSIRDWDYIFLFQLAVQTYKSCCQHLYKVVTPITQNQGNGDKHLKPQTELLRTLMRHHREEADEADDEKETNNPS

TrEMBL top hitse value%identityAlignment
A0A0A9D947 Similar to YSL6 (YELLOW STRIPE LIKE 6)1.5e-0852.94Show/hide
Query:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATT----PPCEAPAHAPIL
        M HP A+PI+W TNIDRGE+ V YP+LKSC+RS     M ++ P AA PA T    P  EA A + IL
Subjt:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATT----PPCEAPAHAPIL

A0A0P0WCM0 Os04g0524700 protein6.3e-2075.38Show/hide
Query:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR
        MTHP+AVPITWLTN+D G+ SV YPVLKSCIRSDAV+TM IITPQAA P +TPP +APAHAP ++
Subjt:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR

A0A5K0WTT0 Uncharacterized protein (Fragment)1.6e-1054.55Show/hide
Query:  THPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKD
        THP+AVPI WL  ID GE  V + VLKSCIRS  +ET+ +I+PQ  +PA TPP   PAHA  ++ +
Subjt:  THPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKD

Q0JBM1 Os04g0524700 protein6.3e-2075.38Show/hide
Query:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR
        MTHP+AVPITWLTN+D G+ SV YPVLKSCIRSDAV+TM IITPQAA P +TPP +APAHAP ++
Subjt:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILR

T1LAR7 Uncharacterized protein8.3e-1257.97Show/hide
Query:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKDMW
        MT P AVPI   TN+D G++ V YPVLKSC+RS  V+TM IITPQAAKPA TPPC  P H   +++ ++
Subjt:  MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKDMW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCATCCCATGGCAGTGCCTATTACCTGGCTCACGAACATAGACCGTGGTGAAGATAGTGTCATGTATCCAGTCTTGAAATCCTGCATCAGATCTGATGCTGTAGA
GACAATGTTCATCATTACTCCGCAAGCTGCTAAGCCTGCAACAACTCCACCATGCGAAGCACCAGCCCATGCTCCGATCCTGAGAAAAGATATGTGGCAATGTGGCTATG
GATACGGCTGCAATCACAACATATCCTCCAACGGAAAACCAGGAGGGAATCTGATCTTTGAGGAAGAGTTGAGTCCTCCGTTTGTCATCAAACGTAACATTGGAGGTCGA
AGGAGCGGAAGCATCCGAGACTGGGATTACATCTTTCTTTTTCAACTGGCGGTGCAAACCTATAAGAGTTGTTGCCAACACCTTTACAAAGTTGTAACACCCATCACCCA
GAATCAAGGCAATGGAGACAAACACCTAAAGCCACAAACAGAATTACTAAGAACATTAATGAGGCACCACCGAGAAGAGGCCGATGAAGCTGACGATGAAAAGGAAACCA
ATAATCCATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCATCCCATGGCAGTGCCTATTACCTGGCTCACGAACATAGACCGTGGTGAAGATAGTGTCATGTATCCAGTCTTGAAATCCTGCATCAGATCTGATGCTGTAGA
GACAATGTTCATCATTACTCCGCAAGCTGCTAAGCCTGCAACAACTCCACCATGCGAAGCACCAGCCCATGCTCCGATCCTGAGAAAAGATATGTGGCAATGTGGCTATG
GATACGGCTGCAATCACAACATATCCTCCAACGGAAAACCAGGAGGGAATCTGATCTTTGAGGAAGAGTTGAGTCCTCCGTTTGTCATCAAACGTAACATTGGAGGTCGA
AGGAGCGGAAGCATCCGAGACTGGGATTACATCTTTCTTTTTCAACTGGCGGTGCAAACCTATAAGAGTTGTTGCCAACACCTTTACAAAGTTGTAACACCCATCACCCA
GAATCAAGGCAATGGAGACAAACACCTAAAGCCACAAACAGAATTACTAAGAACATTAATGAGGCACCACCGAGAAGAGGCCGATGAAGCTGACGATGAAAAGGAAACCA
ATAATCCATCCTAA
Protein sequenceShow/hide protein sequence
MTHPMAVPITWLTNIDRGEDSVMYPVLKSCIRSDAVETMFIITPQAAKPATTPPCEAPAHAPILRKDMWQCGYGYGCNHNISSNGKPGGNLIFEEELSPPFVIKRNIGGR
RSGSIRDWDYIFLFQLAVQTYKSCCQHLYKVVTPITQNQGNGDKHLKPQTELLRTLMRHHREEADEADDEKETNNPS