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Carg06099 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06099
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:21901991..21905272
RNA-Seq ExpressionCarg06099
SyntenyCarg06099
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602729.1 Phosphoribosylaminoimidazole carboxylase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0883.33Show/hide
Query:  VVQPSLTLEVVEKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSG
        V+  +  LE  EKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSG
Subjt:  VVQPSLTLEVVEKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSG
KAG7033418.1 hypothetical protein SDJN02_07474, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-125100Show/hide
Query:  MERKERIPSKVTPSPPTANLPIFMEEICIFINMPIPVVQPSLTLEVVEKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSGDYRKENASQYTLKYDL
        MERKERIPSKVTPSPPTANLPIFMEEICIFINMPIPVVQPSLTLEVVEKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSGDYRKENASQYTLKYDL
Subjt:  MERKERIPSKVTPSPPTANLPIFMEEICIFINMPIPVVQPSLTLEVVEKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSGDYRKENASQYTLKYDL

Query:  SLNSQEVCIGRIRKHTIKDEKNEKRSPFPSKGTLQKYQRTSPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFSESGDASETSEEPIAAKDNMSPPTI
        SLNSQEVCIGRIRKHTIKDEKNEKRSPFPSKGTLQKYQRTSPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFSESGDASETSEEPIAAKDNMSPPTI
Subjt:  SLNSQEVCIGRIRKHTIKDEKNEKRSPFPSKGTLQKYQRTSPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFSESGDASETSEEPIAAKDNMSPPTI

Query:  SFELFTSLLAPDRIIFASEPITKKEAPKQLQDRLAQRI
        SFELFTSLLAPDRIIFASEPITKKEAPKQLQDRLAQRI
Subjt:  SFELFTSLLAPDRIIFASEPITKKEAPKQLQDRLAQRI
TrEMBL top hitse value%identityAlignment
A0A2P2MMV8 Uncharacterized protein MANES_S0095001.7e-0667.39Show/hide
Query:  SPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFSESGDASETSE
        SPPS+GLLVCARY   P  CS+TSSN AML GVFFS+SGD S   +
Subjt:  SPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFSESGDASETSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAAGGAGAGAATACCGAGTAAAGTGACCCCAAGCCCGCCAACAGCAAATCTCCCCATTTTTATGGAGGAAATTTGCATATTCATTAACATGCCAATCCCGGT
CGTTCAGCCTTCACTAACCTTAGAAGTTGTAGAGAAGTTTCGTATCACATTCTCATCGGAAAATGTCAAAGAAAGCTCTTCTTCAATAGTTTCTCTTCGGTTGTACCAGC
AATCATTTGAATCGGGTTCAGTATATTCTGGAGATTACCGGAAAGAGAACGCTTCTCAGTATACCCTCAAATATGATTTGTCGTTAAACTCTCAAGAAGTTTGCATCGGT
CGCATTCGAAAACATACCATTAAAGATGAAAAAAATGAAAAGCGCTCACCATTCCCAAGCAAAGGTACTTTACAGAAATACCAGCGAACATCGCCGCCGTCGGAAGGACT
CCTTGTCTGTGCAAGATACTTGTGCCTACCTTCGCAGTGCTCGATGACATCCTCCAATTTTGCAATGTTAGAGGGCGTGTTCTTCAGCGAATCAGGGGACGCTTCTGAAA
CTTCAGAAGAACCTATAGCTGCCAAAGACAACATGTCACCGCCAACCATATCTTTCGAACTATTTACATCCCTTTTGGCGCCTGATCGAATAATTTTTGCCTCGGAACCT
ATCACTAAGAAAGAGGCTCCGAAGCAATTACAGGACAGGTTAGCTCAGAGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAAAGGAGAGAATACCGAGTAAAGTGACCCCAAGCCCGCCAACAGCAAATCTCCCCATTTTTATGGAGGAAATTTGCATATTCATTAACATGCCAATCCCGGT
CGTTCAGCCTTCACTAACCTTAGAAGTTGTAGAGAAGTTTCGTATCACATTCTCATCGGAAAATGTCAAAGAAAGCTCTTCTTCAATAGTTTCTCTTCGGTTGTACCAGC
AATCATTTGAATCGGGTTCAGTATATTCTGGAGATTACCGGAAAGAGAACGCTTCTCAGTATACCCTCAAATATGATTTGTCGTTAAACTCTCAAGAAGTTTGCATCGGT
CGCATTCGAAAACATACCATTAAAGATGAAAAAAATGAAAAGCGCTCACCATTCCCAAGCAAAGGTACTTTACAGAAATACCAGCGAACATCGCCGCCGTCGGAAGGACT
CCTTGTCTGTGCAAGATACTTGTGCCTACCTTCGCAGTGCTCGATGACATCCTCCAATTTTGCAATGTTAGAGGGCGTGTTCTTCAGCGAATCAGGGGACGCTTCTGAAA
CTTCAGAAGAACCTATAGCTGCCAAAGACAACATGTCACCGCCAACCATATCTTTCGAACTATTTACATCCCTTTTGGCGCCTGATCGAATAATTTTTGCCTCGGAACCT
ATCACTAAGAAAGAGGCTCCGAAGCAATTACAGGACAGGTTAGCTCAGAGGATTTAG
Protein sequenceShow/hide protein sequence
MERKERIPSKVTPSPPTANLPIFMEEICIFINMPIPVVQPSLTLEVVEKFRITFSSENVKESSSSIVSLRLYQQSFESGSVYSGDYRKENASQYTLKYDLSLNSQEVCIG
RIRKHTIKDEKNEKRSPFPSKGTLQKYQRTSPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFSESGDASETSEEPIAAKDNMSPPTISFELFTSLLAPDRIIFASEP
ITKKEAPKQLQDRLAQRI